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Name : gspD (P12B_c3065) Accession : YP_006170068.1 Strain : Escherichia coli P12b Genome accession: NC_017663 Putative virulence/resistance : Virulence Product : General secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 3350833 - 3352683 bp Length : 1851 bp Strand : - Note : - DNA sequence : ATGGGGCCGGGCGTTCAGGGGAAAGTGAGTATTCGCACCATGACCCCGCTCAATGAACGTCAGTATTACCAGCTATTCCT TAACCTGCTGGAAGCACAGGGGTATGCCGTCGTACCGATGGAAAACGACGTGCTGAAGGTGGTGAAATCCAGCGCCGCGA AAGTCGAGCCGCTGCCGCTGGTCGGTGAAGGCAGCGACAACTACGCGGGCGATGAAATGGTTACCAAAGTAGTGCCGGTA CGCAATGTGTCGGTACGCGAGCTGGCGCCGATTTTGCGCCAGATGATCGACAGCGCAGGCTCAGGCAACGTTGTTAATTA CGATCCCTCCAACGTGATTATGCTCACCGGACGCGCCTCAGTCGTGGAGCGTCTGACGGAGGTGATCCAGCGCGTGGATC ATGCGGGAAACCGCACTGAAGAGGTGATCCCGCTGGATAACGCCTCAGCTTCGGAAATTGCCCGCGTGCTGGAAAGCCTG ACTAAAAACAGCGGCGAGAACCAACCAGCAACACTGAAATCTCAAATTGTCGCCGACGAACGCACCAACAGTGTGATTGT CAGTGGTGACCCGGCCACGCGGGACAAAATGCGCCGCCTGATCCGTCGGCTGGACTCAGAAATGGAACGCAGCGGCAACA GCCAGGTTTTCTATCTCAAATACAGCAAAGCCGAAGATCTGGTCGATGTGCTGAAGCAGGTCAGCGGCACGCTCACGGCG GCTAAAGAAGAGGCGGAAGGCACGGTCGGTAGCGGGCGTGAGGTTGTCTCCATCGCCGCCAGCAAACACAGTAATGCCCT GATTGTAACCGCGCCGCAGGACATCATGCAGTCGCTGCAAAGCGTGATTGAACAACTGGATATTCGCCGTGCTCAGGTGC ATGTCGAGGCGTTGATCGTGGAAGTTGCCGAAGGCAGTAATATCAACTTCGGCGTGCAGTGGGCGTCGAAAGATGCCGGA TTAATGCAGTTTGCTAACGGTACGCAGATCCCTATTGGCACGCTGGGGGCAGCCATTTCTCAGGCGAAACCGCAGAAAGG CTCCACGGTGATCAGTGAAAACGGCGCTACCACCATTAATCCGGATACCAACGGCGATCTCTCCACACTCGCCCAGCTTC TTTCTGGATTCAGCGGTACGGCGGTTGGCGTGGTGAAAGGCGACTGGATGGCGCTGGTGCAGGCGGTTAAAAACGACTCC AGTTCTAACGTACTCTCCACGCCGAGCATCACCACGCTGGACAACCAGGAAGCCTTCTTCATGGTAGGCCAGGATGTTCC GGTATTAACCGGCTCTACCGTTGGCTCCAATAACAGTAATCCTTTCAATACAGTAGAAAGGAAAAAAGTCGGCATCATGC TGAAAGTCACGCCGCAGATTAACGAAGGTAACGCGGTACAGATGGTGATTGAGCAGGAAGTCTCGAAGGTGGAAGGACAG ACCAGCCTCGACGTGGTGTTTGGCGAGCGCAAACTGAAAACCACCGTGCTGGCTAACGATGGTGAGCTGATTGTGCTTGG CGGTCTGATGGACGACCAGGCGGGAGAAAGCGTGGCGAAAGTGCCGCTGCTGGGCGATATCCCATTGATTGGTAACCTGT TTAAATCGACGGCGGATAAAAAAGAAAAACGTAACCTGATGGTGTTTATCCGCCCGACCATTCTGCGTGACGGTATGGCG GCAGACGGTGTGTCGCAGCGCAAATATAACTATATGCGCGCCGAACAGATCTATCGCGATGAGCAAGGCTTAAGCCTGAT GCCGCACACCGCACAGCCGGTACTGCCAGCGCAAAACCAGGCCTTACCGCCGGAAGTCCGCGCATTCCTCAATGCCGGGA GAACGCGTTAA Protein sequence : MGPGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKSSAAKVEPLPLVGEGSDNYAGDEMVTKVVPV RNVSVRELAPILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQRVDHAGNRTEEVIPLDNASASEIARVLESL TKNSGENQPATLKSQIVADERTNSVIVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTA AKEEAEGTVGSGREVVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALIVEVAEGSNINFGVQWASKDAG LMQFANGTQIPIGTLGAAISQAKPQKGSTVISENGATTINPDTNGDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDS SSNVLSTPSITTLDNQEAFFMVGQDVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSKVEGQ TSLDVVFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLIGNLFKSTADKKEKRNLMVFIRPTILRDGMA ADGVSQRKYNYMRAEQIYRDEQGLSLMPHTAQPVLPAQNQALPPEVRAFLNAGRTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 0.0 | 100 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspD | YP_006170068.1 | General secretion pathway protein D | VFG2047 | Protein | 0.0 | 99 |
