Gene Information

Name : gspH (P12B_c3061)
Accession : YP_006170064.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Virulence
Product : General secretion pathway protein H
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3347078 - 3347608 bp
Length : 531 bp
Strand : -
Note : -

DNA sequence :
ATGTTGGTGATTTTCCTTATCGGCCTTGCCAGTTCGGGCGTGGTACAGACGTTTGCGACCGATTCTGAACCGCCCGCGAA
AAAAGCGGCACAGGATTTTCTGACTCGCTTTGCGCAGTTTAAGGACAGGGCAGTGATTGAAGGGCAGACACTCGGTGTGC
TAATCGACGCGCCTGGCTATCAGTTTATGCAGCGTCGTCAGGGGCAGTGGTTGCCCGTTTCCGCGACCCGGTTATCGGCA
CAGGTTACGGTGCCAAAACAGGTGCAGATGCTGTTACAACCCGGAAGTGATATCTGGCAGAAGGAGTATGCGCTGGAGCT
GCAACGTCGTCGCCTGACGCTGCACGATATTGAACTGGAGCTGCAAAAAGAGGCGAAAAAGAAGACGCCGCAGATCCGTT
TTTCGCCTTTTGAACCCGCCACGCCGTTTACGCTGCGCTTCTACTCGGCGGCGCAAAACGCATGTTGGGCGGTAAAACTG
GCGCACGATGGCGCGTTATCCCTCAATCAATGTGATGAGAGGATGCCATGA

Protein sequence :
MLVIFLIGLASSGVVQTFATDSEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDAPGYQFMQRRQGQWLPVSATRLSA
QVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYSAAQNACWAVKL
AHDGALSLNQCDERMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspH CAE85230.1 GspH, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-79 99
gspH YP_854403.1 type II secretion protein GspH Not tested PAI I APEC-O1 Protein 6e-79 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspH YP_006170064.1 General secretion pathway protein H VFG2051 Protein 3e-78 96