Gene Information

Name : gspJ (P12B_c3059)
Accession : YP_006170062.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Virulence
Product : General secretion pathway protein GspJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3346114 - 3346677 bp
Length : 564 bp
Strand : -
Note : -

DNA sequence :
ATGTTGGTGGCAATTGCCATTTTTGCCTCGCTGGCACTGATGGCGCAGCAGGTGACTAACGGCGTCACGCGCGTGAATAG
CGCCGTCGCCGATCACGATCAAAAACTAAACCTCATGCAGCAAACGATGAGTTTTCTGACCCACGATCTGACCCAAATGA
TGCCGCGTCCGGTAAGAGGCGATCAGGGCCAGCGTGAACCAGCTTTACTGGCTGGCGCTGGCGTGCTGGCGTCTGAGAGT
GAAGGAATGCGTTTTGTGCGCGGCGGTGTGGTTAACCCGTTGATGCGTCTGCCGCGCAGTAATCTGCTCACCGTCGGTTA
CCGCATTCATGACGGTTATCTCGAACGGTTAGCCTGGCCGCTGACCGATGCCGCAGGCAGCGTGAAGCCGACAATGCAAA
AGTTGATTCCGGCCGATTCGCTCCGTTTGCAGTTCTACGACGGCACGCGCTGGCAGGAGAGCTGGTCGTCAGTACAGGCG
ATCCCTGTGGCGGTACGCATGACCCTGCATTCGCCGCAATGGGGCGAGATTGAACGCATCTGGTTGTTACGCGGGCCGCA
ATAA

Protein sequence :
MLVAIAIFASLALMAQQVTNGVTRVNSAVADHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPALLAGAGVLASES
EGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDGTRWQESWSSVQA
IPVAVRMTLHSPQWGEIERIWLLRGPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspJ YP_854401.1 type II secretion protein GspJ Not tested PAI I APEC-O1 Protein 1e-82 98
gspJ CAE85228.1 GspJ, hypothetical type II secretion protein Not tested PAI V 536 Protein 7e-83 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspJ YP_006170062.1 General secretion pathway protein GspJ VFG2053 Protein 1e-84 99