Gene Information

Name : tnpA (P12B_c0298)
Accession : YP_006167353.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 320919 - 322217 bp
Length : 1299 bp
Strand : +
Note : -

DNA sequence :
ATGGACGACAAACAATTGCAGGCTCTGGCTAACGAACTGGCCAAAAATCTCAAAACCCCTGAAGATCTCAGTCAGTTCGA
TCGCCTGCTCAAGAAAATCAGTGTTGAGGCTGCTCTCAACGCTGAACTGACTCACCATCTGGGACATGAAAAAAATCAGC
CCAAATCGGGAACCAACTCCCGTAATGGCTATTCCACGAAAACCGTCACCACTACCGACGGGCCGATGGAATTACGTACT
CCACGTGATCGTGATGGTTCCTTCGAACCACAACTGGTGAAGAAAAATCAGACCCGCATTACCGGCATGGACAACCAGAT
CCTGGCGCTGTATGCCAGAGGGATGACTACCCGCGAAATTACCTCAGTCTTCAAAGAAATGTACGATGCAGACGTCTCTC
CGGCGCTGATATCGAAAGTCACCGATGCCGCAATCGACCAGGTTGTAGAATGGCAAAACCGTCCTCTGGATGCGATTTAT
CCCATTGTTTATCTTGAATGTATTGTCCTGAAAGTACGGCAGGACAGCCGGGTTATCAACAGAGCGGTGTTCCTGGCTCT
GGGTATTAACCTTGATGGTCAGAAAGAGCTGCCAGGTATGTGGCTGGCCGAAAATGAAGGTGCAAAGTTCTGGCTGAATG
TACTGACGGAACTGAAAAATCGCGGGCTGAACGATATCCTTATCGCCTGTGTGGACGGCCTGAAAGGCTTCCCGGAAGCG
ATTAATGCCGTCTACCCGGAGACGCAGATCCAGTTGTGCATAGTACACATGGCACGCAACAGCCTGCGGTTCTTGGCGTG
GAAAGACTATAAAGCGGTAACCCGTGACCTGAAACAGGTTTACCGCGCAGCTACGGAAGAAGGCGCGTTGCAGGCGCTGG
ATGCGTTCGGGAAGGAATGGGATGCACGGTACCCGCAGATAAGTCGCAGCTGGCGGGCAAACTGGCCGAATGTTGCCACC
TTCTTCGTGTATTCGGAGGCGATCCGCAAGGTTATCTACACCACTAACGCAATCGAATCGCTGAATAGCGTCATCAGACA
TGCGATAAAGAAACGGAAAGTGTTCCCGATAGATGAATCGGTGAAAAAAGTGATGAGGCTGGCTATCCAGTCAGCCTCAC
AGAAATGGACGATGCCACTTCAGGACTGGCGGATAGCCATGAGTCGCTTTATTATCGAGTTCGGTGACTGTTGTGGTCAA
CTAAAACTGGCCACCGCGTTAGAGTTTTTCCAGTATCGGTTTTCTGATTCGTTTGGTGGTAACCCACCATTATATTCGTG
CGGTCTTAGTGCGCTGTAA

Protein sequence :
MDDKQLQALANELAKNLKTPEDLSQFDRLLKKISVEAALNAELTHHLGHEKNQPKSGTNSRNGYSTKTVTTTDGPMELRT
PRDRDGSFEPQLVKKNQTRITGMDNQILALYARGMTTREITSVFKEMYDADVSPALISKVTDAAIDQVVEWQNRPLDAIY
PIVYLECIVLKVRQDSRVINRAVFLALGINLDGQKELPGMWLAENEGAKFWLNVLTELKNRGLNDILIACVDGLKGFPEA
INAVYPETQIQLCIVHMARNSLRFLAWKDYKAVTRDLKQVYRAATEEGALQALDAFGKEWDARYPQISRSWRANWPNVAT
FFVYSEAIRKVIYTTNAIESLNSVIRHAIKKRKVFPIDESVKKVMRLAIQSASQKWTMPLQDWRIAMSRFIIEFGDCCGQ
LKLATALEFFQYRFSDSFGGNPPLYSCGLSAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 2e-149 74
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 8e-84 46
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 5e-76 42