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Name : epaP (P12B_c2960) Accession : YP_006169967.1 Strain : Escherichia coli P12b Genome accession: NC_017663 Putative virulence/resistance : Virulence Product : Type III secretion apparatus protein Function : - COG functional category : - COG ID : - EC number : - Position : 3228306 - 3228824 bp Length : 519 bp Strand : - Note : - DNA sequence : ATGACACTTAATGGGGTTGCTTTGCTATTGTCAATGTTTGTAATGATGCCGGTTGGGAAGGAAATATATTATAACAGTCA GAATGAGAATCTTTCATTCAATAATGTAGCGTCGGTTGTTAATTTTGTTGAGACAGGCATGAGTGGTTATAAATCATATT TGATAAAATATTCCGAACCGGAGTTGGTTAACTTTTTTGAAAAGATTCAGAAGGTGAATAGCTCTGAAGACAATGAAGAG ATATTCGATGATGATAATATTTCAATTTTCTCGTTACTCCCGGCATATGCGTTGAGTGAGATAAAAAGTGCATTTATTAT AGGTTTTTATATCTATTTACCCTTTGTTGTAGTGGATCTGGTTATATCCAGCGTTCTGTTAACGTTAGGTATGATGATGA TGAGTCCGGTAACCATATCTACACCGATAAAATTAATTTTGTTTGTCGCGATGGACGGTTGGACAATGTTATCAAAAGGA CTCATTTTACAATATTTTGACCTATCCATTAATCCCTGA Protein sequence : MTLNGVALLLSMFVMMPVGKEIYYNSQNENLSFNNVASVVNFVETGMSGYKSYLIKYSEPELVNFFEKIQKVNSSEDNEE IFDDDNISIFSLLPAYALSEIKSAFIIGFYIYLPFVVVDLVISSVLLTLGMMMMSPVTISTPIKLILFVAMDGWTMLSKG LILQYFDLSINP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaP | NP_311752.1 | surface presentation of antigens protein SpaP | Not tested | LIM | Protein | 7e-50 | 99 |
| epaP | AAZ31293.1 | EpaP | Virulence | ETT2 | Protein | 4e-49 | 98 |
| spaP | NP_457284.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 4e-32 | 63 |
| spaP | NP_806493.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 4e-32 | 63 |
| spaP | YP_217809.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 2e-32 | 63 |
| spaP | NP_461811.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 2e-32 | 63 |
| ysaR | AAS66846.1 | YsaR | Not tested | SSR-1 | Protein | 3e-28 | 54 |
| spaP | AAS66865.1 | SpaP | Not tested | SSR-2 | Protein | 1e-32 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| epaP | YP_006169967.1 | Type III secretion apparatus protein | VFG0551 | Protein | 6e-33 | 63 |
| epaP | YP_006169967.1 | Type III secretion apparatus protein | VFG1773 | Protein | 9e-35 | 61 |
| epaP | YP_006169967.1 | Type III secretion apparatus protein | VFG2455 | Protein | 3e-32 | 58 |
| epaP | YP_006169967.1 | Type III secretion apparatus protein | VFG1012 | Protein | 4e-27 | 54 |
| epaP | YP_006169967.1 | Type III secretion apparatus protein | VFG0188 | Protein | 1e-16 | 42 |
| epaP | YP_006169967.1 | Type III secretion apparatus protein | VFG0394 | Protein | 4e-16 | 42 |
