Gene Information

Name : P12B_c0280 (P12B_c0280)
Accession : YP_006167335.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 302062 - 302925 bp
Length : 864 bp
Strand : -
Note : ykfA

DNA sequence : 
ATGAACAATTCTGAAGGTTTGAAGTCGTTTCAGCAATCGCTTGCTGGCCTGCCACAGTGGGTGTCTGAACGTATATTGCA
GCAGATAAATCAGTTAACCCATTACGAGCCAGTAATCGGCATTATGGGTAAGAGCGGTGCCGGTAAATCCTCACTCTGCA
ATGCCCTGTTTGCCAGTGAGGTATCACCGGTCAGCGATGTCGCGGCCTGTACACGTGAGCCACTGCGCTTTCGACTGCAG
GTTGGCGACTGCTATATGACGCTGATGGATCTACCCGGCGTGGGCGAAAGTGGCACGCGCGATACCGAGTATGCTGCGCT
GTACCGAGAGCAGCTTTCTCGCCTCGACCTGGTACTGTGGCTGATTAAGGCTGATGACCGGGCACTGGCAGTGGATGAGC
ACTTTTATCATCAGGTGATTGGGGAGGCATACCGGCATAAAGTGCTGTTTGTTATAAGCCAGTCGGACAAGGCCGAACCC
ACCAGCGGTGGGGGACCGTTGTCCACCGCGCAGAAGCAGAATATCAGCCGCAAAATCTGCCTGCTGCATGAGCTGTTCCA
GCCCGTACATCCGGTGTGTGCTGTGTCGGTCCGTCTACAATGGGGGCTTAGGGTGATGGCCGAGCGGATGATTAAGTGCC
TGCCACGTGAGGCCACCAGCCCGGTGGTGTCGCAACTCCAGCCTTCCTTTCGCACGACGGTAGTCCGGGAACAGGCTCGA
AGCGATTTTGGTGAAACCGTCGGTGCTCTACTCGATAGCATCAGTGCCTTTCCTCTGATACCCACACCTGTGCGGGCCGT
CATTCAGGCCGTGCGCACCACCGTGGTCTCTGTGGCCCGCGCCGTCTGGGATTTCTTCTTCTGA

Protein sequence : 
MNNSEGLKSFQQSLAGLPQWVSERILQQINQLTHYEPVIGIMGKSGAGKSSLCNALFASEVSPVSDVAACTREPLRFRLQ
VGDCYMTLMDLPGVGESGTRDTEYAALYREQLSRLDLVLWLIKADDRALAVDEHFYHQVIGEAYRHKVLFVISQSDKAEP
TSGGGPLSTAQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLRVMAERMIKCLPREATSPVVSQLQPSFRTTVVREQAR
SDFGETVGALLDSISAFPLIPTPVRAVIQAVRTTVVSVARAVWDFFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL99256.1 unknown Not tested LEE Protein 2e-56 52
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 8e-56 51
Z1210 NP_286745.1 histone Not tested TAI Protein 4e-55 51
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 4e-55 51
unnamed AAL08471.1 unknown Not tested SRL Protein 6e-57 51
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 1e-55 51
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 5e-57 51
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 4e-56 51
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 3e-57 51
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 2e-56 51
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 2e-56 51
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 2e-56 51
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 4e-55 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c0280 YP_006167335.1 hypothetical protein VFG1674 Protein 3e-57 51
P12B_c0280 YP_006167335.1 hypothetical protein VFG1062 Protein 3e-57 51
P12B_c0280 YP_006167335.1 hypothetical protein VFG0654 Protein 5e-56 51