Gene Information

Name : P12B_c0275 (P12B_c0275)
Accession : YP_006167330.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 298149 - 298772 bp
Length : 624 bp
Strand : -
Note : -

DNA sequence : 
ATGCCGGTGAAGGTCTTAACCGCTATATCCGCACCTCAGGCATCCGTACAGACACGGCCACCCGCTGATCGCGAAGCATT
TACCCGCATTCACCTCCCCGAACACACTTTATATCCCCATACGCCAGCCATCGCCGCTGGCGTTTTTATTGACGGAGACA
TACCCATGACAACACAGACGCAGCACGACCTCGCACCCGCTAACCAACCCGAATTTGAACTGACCGTCACGCCGGTCCCC
GATGAACAGCGTATCGATTTCTGGCCACAGTACTTTGGCGCTATCCCGCAGTGGCTACTCCTGGAGCCGCATATCTTCGC
CTGGATGGACCGCTTCTGTGAGGGCTACAGCGGTGGTATCTGGTCGTTCTACACCCTCAGCAATGGCGGCGCATTTATGT
CCCCCGAGCCTGACAACGATGAGACATGGCGTCTGTTTAACTGCCTGAACGGTAACGATGCCCAAATGAGTGCAGAAGCA
GCAGGTATTGCTGTCTGCCTGATTGCGTATAGCCACCATGCCTGCCGTACAGAATGTGACGCGATGACCGCACACTATTA
CCGCCTGCGGGAGTATGCCATGCAACATCCAGAGGCTCACGCCATTCTGCGTATTATCGACTGA

Protein sequence : 
MPVKVLTAISAPQASVQTRPPADREAFTRIHLPEHTLYPHTPAIAAGVFIDGDIPMTTQTQHDLAPANQPEFELTVTPVP
DEQRIDFWPQYFGAIPQWLLLEPHIFAWMDRFCEGYSGGIWSFYTLSNGGAFMSPEPDNDETWRLFNCLNGNDAQMSAEA
AGIAVCLIAYSHHACRTECDAMTAHYYRLREYAMQHPEAHAILRIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 5e-49 67
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 2e-44 66
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 2e-44 66
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-44 66
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-44 66
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-44 66
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-44 66
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 2e-44 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c0275 YP_006167330.1 hypothetical protein VFG1527 Protein 2e-49 67
P12B_c0275 YP_006167330.1 hypothetical protein VFG0659 Protein 5e-45 66