Gene Information

Name : P12B_c0272 (P12B_c0272)
Accession : YP_006167327.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 296729 - 297070 bp
Length : 342 bp
Strand : -
Note : ykfI

DNA sequence :
ATGAAAACTTTACCTGCAACAACTCAGCGGGCGGTGAAGCCCTGCCTGTCACCCGTGGCTGTCTGGCAAATGTTACTGAC
ACGTCTGCTGGAACAGCACTATGGTCTGACAATAAACGACACGCCATTCTGCAATGAGGCTGTGATTAAGGAACACATCG
ATGCCGGTATCACCCTAGCCGATGCCGTGAATTTTCTGGTAGAAAAATACGAGCTGGTTCGTATCGACAGGAAGGGATTT
AGCTGGCAGGAACAATCTCCTTATCTCCGGGCTGCAGACATTCTGCGAGCGCGGCAGGCAACTGGCTTGTTGCGGCAAAG
CCGTAACAACGTAGTACGATGA

Protein sequence :
MKTLPATTQRAVKPCLSPVAVWQMLLTRLLEQHYGLTINDTPFCNEAVIKEHIDAGITLADAVNFLVEKYELVRIDRKGF
SWQEQSPYLRAADILRARQATGLLRQSRNNVVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66207.1 hypothetical protein Not tested PAI III 536 Protein 7e-29 66
unnamed AAL57575.1 unknown Not tested LEE Protein 2e-28 65
unnamed CAI43848.1 hypothetical protein Not tested LEE Protein 6e-28 64
aec76 AAW51759.1 Aec76 Not tested AGI-3 Protein 6e-28 64
unnamed AAL08478.1 unknown Not tested SRL Protein 2e-27 64
unnamed CAD42101.1 hypothetical protein Not tested PAI II 536 Protein 5e-28 64
unnamed AAC31486.1 L0007 Not tested LEE Protein 2e-27 63
unnamed ACU09433.1 conserved hypothetical protein Not tested LEE Protein 2e-27 63
Z5091 NP_290242.1 hypothetical protein Not tested LEE Protein 2e-27 63
ECs4539 NP_312566.1 hypothetical protein Not tested LEE Protein 2e-27 63
unnamed AAK00482.1 unknown Not tested SHI-1 Protein 1e-28 63
yeeV NP_838487.1 hypothetical protein Not tested SHI-1 Protein 2e-28 63
yeeV NP_708773.1 hypothetical protein Not tested SHI-1 Protein 2e-28 63
yeeV ADD91699.1 YeeV Not tested PAI-I AL862 Protein 3e-27 63
c5149 NP_756997.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-27 63
unnamed AAL67389.1 L0007-like protein Not tested PAI II CFT073 Protein 2e-27 63
ECO103_3592 YP_003223449.1 hypothetical protein Not tested LEE Protein 4e-29 62
unnamed AAL67342.1 intergenic-region protein Not tested PAI II CFT073 Protein 7e-28 61
yeeV CAE85204.1 YeeV protein Not tested PAI V 536 Protein 7e-28 60
yeeV YP_854325.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-28 60
z5091 CAD33789.1 Z5091 protein Not tested PAI I 536 Protein 7e-27 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c0272 YP_006167327.1 hypothetical protein VFG1682 Protein 3e-29 66
P12B_c0272 YP_006167327.1 hypothetical protein VFG1069 Protein 7e-28 64
P12B_c0272 YP_006167327.1 hypothetical protein VFG1620 Protein 2e-28 64
P12B_c0272 YP_006167327.1 hypothetical protein VFG0786 Protein 7e-28 63
P12B_c0272 YP_006167327.1 hypothetical protein VFG0663 Protein 5e-29 63
P12B_c0272 YP_006167327.1 hypothetical protein VFG1530 Protein 3e-27 59