Gene Information

Name : P12B_c2755 (P12B_c2755)
Accession : YP_006169765.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3004405 - 3005634 bp
Length : 1230 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAAAATCGCTAAGAAGCTCACTGACACTGAAATCAAAAGCACCAAGCCAGCCGACAAAGAAATCAACTTGTTTGA
CGGAGATGGTTTGATACTACGAATCGCTCCCCTCTCGAAAGGAGGAAAGAAGAATTGGTATTTCAGGTATGCAGTGCCAG
TCAGTAAAAAAAGAACCAAAATGAGCCTTGGGACATATCCTCACCTTACACTGGCAAGAGCCAGAGCCTTACGAGATGAA
TACCTTTCCTTGCTTGCTAATGGCATTGATCCCCAAGTTCATAACAACGATAAAGCTAATGCCTTAAAGAATGCTACTGA
ACACACTCTCCAAGCCGTGGCAAGGAAATGGTTGGATGAGAAGGTAAAGACCTCAGGTATCTCACAAGACCATGCAGCAG
ACATCTGGCGCAGCTTAGAGAGAAATGTCTTTCCTGGCCTGGGTAATGTCCCTATCAATGAGATCCGACCTAAGATCTTA
AAACAACACCTTGATCCTATTGAGCAACGAGGCGTATTGGAAACTCTACGCCGCATCATTTCACGTCTGAATGAAATCTT
CCGGTGGGCAGCCACTGAAGAACTTATTGAGTTCAATCCGGCTGACAACCTTGGTCAAAGATTCAGTAAACCAAAAAAGC
AAAATATGCCTGCCCTTCCCCCAAGCGAATTGCCAAGGTTTATGGAATCTTTGACGAATGCGTCAATCCGGCTGGAAACA
CGTATGCTAATTGAATGGCAATTGTTGACATGGGTTCGTCCGGGTGAAGCCGTTCGCGCAAGGTGGTCTGATATTGATAC
AACCAACAACATTTGGAACATTCCTGCTGATTTTATGAAAATGAAAAAGCCTCACAAAGTTCCTTTGAGTAAAGAAGCTT
TGCACATCCTTGAATTAATGAAATCAATAAGTGGGCATAGAGAATGGGTTTTCCCCAGCATTAAAGCGCCTCTTAATCAT
ATGCATGAACAAACAGCCAACGCAGCTATTATCCGAATGGGGTTTGGAGGCGAACTTGTAGCTCACGGTATGCGTTCGAT
TGCAAGAACAGCGGCAGAGGAGTCTGGTAAGTTCAGAGCTGAAGTTCTTGAGGCAGCACTCGCCCACTCTAAAAAAGATG
AAATTATCGCAGCATACAATCGTGCAGAATATCTGATAGAACGACAGAGTTTGATGCAATGGTGGAGTGATTACGTTCAA
ACTCAAAGAGCTAAAGCTATCGCTGCTTGA

Protein sequence :
MAKIAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLSKGGKKNWYFRYAVPVSKKRTKMSLGTYPHLTLARARALRDE
YLSLLANGIDPQVHNNDKANALKNATEHTLQAVARKWLDEKVKTSGISQDHAADIWRSLERNVFPGLGNVPINEIRPKIL
KQHLDPIEQRGVLETLRRIISRLNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFMESLTNASIRLET
RMLIEWQLLTWVRPGEAVRARWSDIDTTNNIWNIPADFMKMKKPHKVPLSKEALHILELMKSISGHREWVFPSIKAPLNH
MHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRAEVLEAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSDYVQ
TQRAKAIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAK20773.1 integrase Not tested VPI Protein 2e-85 46
int AAK20803.1 integrase Not tested VPI Protein 2e-85 46
unnamed AAA82714.1 integrase Not tested VPI Protein 2e-85 46
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-85 46
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-85 46
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 7e-84 44
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 1e-67 41
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 6e-67 41
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 6e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c2755 YP_006169765.1 phage integrase family protein VFG1092 Protein 2e-67 41