Gene Information

Name : P12B_c1603 (P12B_c1603)
Accession : YP_006168631.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1723521 - 1724618 bp
Length : 1098 bp
Strand : +
Note : -

DNA sequence :
ATGCACAGCTTACTTCCTGACGATATCGATGAACTGAAACGTCTCCTTGCCGAACAGGAGGCGCTGAACCGTGCCCTTCT
GGAAAAGCTGAACGAGCGTGAACGCGAAATAGATCACCTGCAGGCGCAACTGGATAAGCTGCGCCGAATGAACTTCGGCA
GCCGCTCCGAAAAAGTCTCCCGCCGTATCGCGCAGATGGAAGCCGACCTTAAGCAGTTGCAGAAAGAAAGCGATATCCTT
ACCGGTCGGGTGGATGACCCGGCCGTGCAGCGCCCGCTGCGGCAGACCCGTACCCGCAAACCGTTCCCTGAATCACTTCC
CCGTGACGAAAAACGGCTGCTGCCGGCAGCGTCATGCTGCCCGGAATGTGGTGGTGCGCTGAGTTACCTGGGTGAAGATG
CTGCCGAACAGCTGGAGCTGATGCGCAGCGCCTTCCGGGTTATCCGGACAGTACGTGAAAAACATGCCTGTACTCAGTGC
GATGCCATCGTGCAGGCAGCCGCGCCTTCACGGCCCATCGAGCGGGGTATCGCCGGCCCGGGGCTGCTGGCCCGCGTGCT
GACCTCAAAGTATGCAGAGCACACCCCGCTGTACCGCCAGTCTGAAATATACGCCCGCCAGGGTGTGGAGCTGAGCCGTT
CACTGCTGTCGGGCTGGGTGGATGCGTGTTGCCGGCTACTGTCACCGCTGGAAGGGGCGCTTCAGGACTATGTGCTGACT
GACGGCAAGCTCCATGCTGATGACACGCCTGTCCCGGTGCTGTTGCCAGGTAATAAGAAAACGAAGACCGGGCGGTTGTG
GACGTACGTTCGTGACGACCGTAACGCCGGGTCAGAGCTGGCGCCGGCAGTGTGGTTCGCTTACAGCCCGGACAGAAAAG
GTATCCACCCGCGGACCCATCTTGCGGGGTTCAGTGGTGTTCTGCAGGCGGATGCGTACGCCGGGTTCAACGAACTGTAC
CGCAATGGACAGATAACGGAAGCTGCCTGCTGGGCTCATGCCCGCCGCAAGATCCACGATGTGCACGTTCGCACCCCGTC
AGCGCTGACGGAGGAAGCCCTGAAACGGATCGGTGAGTTATATGTAAGCGTCGTCTGA

Protein sequence :
MHSLLPDDIDELKRLLAEQEALNRALLEKLNEREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLKQLQKESDIL
TGRVDDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAASCCPECGGALSYLGEDAAEQLELMRSAFRVIRTVREKHACTQC
DAIVQAAAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYARQGVELSRSLLSGWVDACCRLLSPLEGALQDYVLT
DGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNAGSELAPAVWFAYSPDRKGIHPRTHLAGFSGVLQADAYAGFNELY
RNGQITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYVSVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 2e-148 90
tnp AEA34686.1 transposase Not tested Not named Protein 2e-152 90
unnamed AAL08460.1 unknown Not tested SRL Protein 4e-150 89
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 8e-152 89
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-151 89
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 6e-151 89
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 6e-151 89
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-151 89
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-151 89
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-151 89
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-151 89
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 2e-85 63
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 8e-101 59
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 4e-97 57
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 2e-94 56
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 1e-94 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c1603 YP_006168631.1 hypothetical protein VFG1516 Protein 1e-148 90
P12B_c1603 YP_006168631.1 hypothetical protein VFG1051 Protein 2e-150 89
P12B_c1603 YP_006168631.1 hypothetical protein VFG0793 Protein 6e-152 89
P12B_c1603 YP_006168631.1 hypothetical protein VFG1736 Protein 1e-105 63
P12B_c1603 YP_006168631.1 hypothetical protein VFG1513 Protein 1e-85 63