Gene Information

Name : P12B_c1293 (P12B_c1293)
Accession : YP_006168328.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Unknown
Product : IS1 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1402099 - 1402623 bp
Length : 525 bp
Strand : -
Note : -

DNA sequence :
ATGGCCATGAATGGCGTTGGATGGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAA
AAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGT
GGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCAC
GTATTCGGTGAACGCACGATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGAC
GGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGC
GGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCAT
GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA

Protein sequence :
MAMNGVGWPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAH
VFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELH
DKVIGHYLNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 4e-75 98
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 4e-75 98
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 4e-75 98
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 2e-72 97
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 1e-73 94
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 6e-72 93
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 6e-72 93
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 6e-56 92
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 2e-71 92
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 4e-71 92
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 1e-69 91
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 2e-56 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c1293 YP_006168328.1 IS1 transposase VFG0612 Protein 4e-70 91