Gene Information

Name : P12B_c1260 (P12B_c1260)
Accession : YP_006168295.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Unknown
Product : IS1 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1366439 - 1366942 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence : 
ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAAT
CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG
GCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGA
ATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGC
AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT
CTGAACATAAAACACTATCAATAA

Protein sequence : 
MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTM
ATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 7e-76 98
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 7e-76 98
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 7e-76 98
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 3e-73 97
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 3e-74 95
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 5e-56 92
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 2e-72 92
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 2e-72 92
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 8e-72 91
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 1e-71 91
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 5e-70 90
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 6e-57 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c1260 YP_006168295.1 IS1 protein VFG0612 Protein 1e-70 90