Gene Information

Name : P12B_c1177 (P12B_c1177)
Accession : YP_006168213.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Unknown
Product : IS629 transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1275069 - 1275455 bp
Length : 387 bp
Strand : -
Note : -

DNA sequence :
ATGGAAACGTCGTTCGTGCTGGATGCACTGGAGCAGGCGCTGTGGGCCAGACGCCCGAGCGGTACCATCCATCACAGCGA
CAAAGGTTCGCAATATGTGTCACTGGCGTACACGCAACGGCTGCAGGACGCGGAGCTGCTGGCTTCAACAGGCAGCACGG
GCGACTCATATGACAATGCGATGGCAGAAAGTATCAACGGGTTGTACAAAGCGGAGGTGATCCACAGGCAAAGCTGGAAA
ACCCGACAGGATGTTGAGCTGGCTACGCTGAAATGGGTGGACTGGTACAATAATCACCGATTGATGGAACGGACCGGATA
TATCCCGCCAGTGGAGGCAGAAACAGCCTATTACGCTTCGCTGAATGACCGGGATGTGGCAGCCTGA

Protein sequence :
METSFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYTQRLQDAELLASTGSTGDSYDNAMAESINGLYKAEVIHRQSWK
TRQDVELATLKWVDWYNNHRLMERTGYIPPVEAETAYYASLNDRDVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r15 AAC61720.1 putative transposase R15 Not tested PAI I CFT073 Protein 1e-44 80
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 6e-44 80
unnamed AAT48693.1 unknown Not tested PAI I 4787 Protein 3e-44 79
CDCE8392_1980 YP_005134511.1 transposase-like protein Not tested Not named Protein 7e-17 50
CDC7B_2058 YP_005163499.1 transposase-like protein Not tested Not named Protein 8e-17 48
CDBH8_0931 YP_005160023.1 transposase-like protein Not tested Not named Protein 4e-10 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c1177 YP_006168213.1 IS629 transposase orfB VFG1715 Protein 2e-44 80