Gene Information

Name : P12B_c1060 (P12B_c1060)
Accession : YP_006168098.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Unknown
Product : IS1 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1166711 - 1167235 bp
Length : 525 bp
Strand : -
Note : -

DNA sequence :
ATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAA
AAACTCAGGCCGCAGTCGGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGT
GGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCAC
GTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGAC
GGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGC
GGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCAT
GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA

Protein sequence :
MAMNGVGCRATARIMGVGLNTILRHLKNSGRSRVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAH
VFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELH
DKVIGHYLNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 2e-64 100
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 2e-64 100
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 2e-64 100
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 7e-62 99
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 8e-63 96
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 1e-56 92
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 3e-62 91
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 3e-62 91
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 1e-61 90
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-61 90
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 7e-60 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c1060 YP_006168098.1 IS1 transposase VFG0612 Protein 2e-60 88