Gene Information

Name : nfrC (KO11_02000)
Accession : YP_006162742.1
Strain : Escherichia coli KO11FL
Genome accession: NC_017660
Putative virulence/resistance : Virulence
Product : formate-dependent nitrite reductase, Fe-S centers
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 422507 - 423178 bp
Length : 672 bp
Strand : -
Note : COG0437 Fe-S-cluster-containing hydrogenase components 1

DNA sequence : 
ATGACCTGGTCTCGTCGCCAGTTTCTCACCGGCGTCGGCGTGCTGGCAGCCGTCAGCGGCACCGCAGGGCGCGTGGTGGC
GAAAACGTTGAATATCAATGGGGTGCGTTACGGCATGGTGCATGACGAGTCGTTATGCATCGGCTGTACCGCCTGTATGG
ATGCTTGTCGGGAAGTGAACAAGGTGCCGGAAGGCGTCTCGCGCCTGACGATTATTCGTAGCGAGCCGCAGGGCGAATTT
CCTGATGTGAAATATCGCTTCTTCCGTAAGTCTTGCCAGCACTGCGATCATGCGCCGTGCGTTGACGTCTGCCCGACCGG
TGCGTCTTTTCGCGATGCTGCCAGTGGGATTGTCGATGTTAATCCGGATCTCTGCGTCGGTTGTCAGTACTGCATCGCCG
CCTGTCCGTACCGCGTGCGCTTTATCCATCCGGTCACGAAGACGGCGGACAAATGCGATTTCTGCCGTAAGACCAATTTG
CAGGCCGGTAAGTTGCCCGCGTGCGTTGAAGCTTGCCCGACCAAGGCGCTGACGTTTGGCAATCTGGACGATCCCAACAG
TGAGATTTCGCAACTGCTGCGCCAGAAGCCCACTTACCGCTACAAGCTGGCGCTGGGAACCAAACCGAAGCTGTACCGCG
TACCGTTTAAATACGGGGAGGTGAGCCAATGA

Protein sequence : 
MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEF
PDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNL
QAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-31 41
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-31 41
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 3e-31 41
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 3e-31 41
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nfrC YP_006162742.1 formate-dependent nitrite reductase, Fe-S centers VFG0486 Protein 1e-31 41