Gene Information

Name : gabD (KO11_09700)
Accession : YP_006164266.1
Strain : Escherichia coli KO11FL
Genome accession: NC_017660
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase I
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.16
Position : 2055854 - 2057302 bp
Length : 1449 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGCGAGGT
CATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTACCCAAAATGGGCGCTGATGAAACCCGCGCCGCTA
TCGACGCCGCCAACCGCGCTCTGCCCGCCTGGCGTGCGCTCACCGCCAAAGAACGCGCCAACATTCTGCGCAACTGGTTC
AATTTGATGATGGAGCATCAGGACGATTTAGCGCGTCTGATGACCCTCGAACAGGGTAAACCGCTGGCTGAAGCGAAAGG
TGAAATCAGCTACGCCGCCTCCTTTATTGAGTGGTTTGCTGAAGAAGGCAAACGCATTTATGGCGACACCATTCCCGGTC
ATCAGGCCGATAAACGCCTGATTGTTATCAAGCAGCCGATTGGCGTTACCGCCGCCATCACGCCGTGGAACTTCCCGGCG
GCGATGATTACCCGTAAAGCCGGTCCGGCGCTGGCGGCAGGCTGCACGATGGTGCTGAAACCCGCCAGTCAGACGCCGTT
CTCTGCGCTGGCGCTGGCGGAGCTGGCGATTCGCGCGGGCATTCCGGCTGGGGTATTTAACGTGGTCACCGGTTCGGCGG
GCGCAGTCGGTAACGAACTGACCAGCAACCCGCTGGTGCGCAAACTGTCGTTTACCGGTTCGACCGAAATTGGCCGCCAG
TTAATGGAACAATGCGCGAAAGACATCAAAAAAGTGTCGCTGGAGCTCGGCGGCAACGCGCCGTTTATCGTCTTTGACGA
TGCCGACCTCGACAAAGCCGTGGAAGGCGCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACCTGCGTCTGCGCCAACC
GTTTATACGTGCAGGACGGCGTGTATGACCGCTTTGCCGAAAAATTGCAGCAGGCGGTGAGCAAACTGCACATCGGCGAC
GGGCTGGATAAAGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCAGTAGCAAAAGTGGAAGAGCATATTGCCGATGC
GCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCACACGAACGTGGCGGCAACTTCTTCCAGCCGACCATTCTGG
TGGACGTTCCGGCCAACGCTAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTCGCCCCGCTGTTCCGTTTTAAAGATGAA
GCCGATGTGATCGCGCAAGCCAATGACACCGAATTTGGTCTTGCCGCCTATTTCTACGCCCGTGATTTAAGCCGCGTCTT
CCGCGTGGGCGAAGCGCTGGAGTACGGCATCGTCGGCATCAATACCGGGATTATTTCCAATGAAGTGGCCCCGTTCGGCG
GCATCAAAGCCTCGGGTCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTACTTAGAAATCAAATATATGTGCATC
GGTCTTTAA

Protein sequence :
MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRNWF
NLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA
AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGD
GLDKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE
ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-158 67