Gene Information

Name : NRG857_30080 (NRG857_30080)
Accession : YP_006162228.1
Strain :
Genome accession: NC_017659
Putative virulence/resistance : Unknown
Product : IS1 transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 44016 - 44519 bp
Length : 504 bp
Strand : +
Note : Sequence similarity to: NP_052905.1 transposition protein B [Plasmid R100]

DNA sequence : 
ATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAAT
CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG
GCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGA
ATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGC
AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT
CTGAACATAAAACACTATCAATAA

Protein sequence : 
MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTM
ATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 1e-77 100
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 1e-77 100
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 1e-77 100
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 3e-75 99
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 3e-76 97
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 8e-56 92
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 5e-71 90
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 5e-71 90
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 2e-70 89
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 3e-70 89
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 1e-68 88
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 1e-55 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NRG857_30080 YP_006162228.1 IS1 transposase orfB VFG0612 Protein 4e-69 88