Gene Information

Name : sitA (NRG857_30260)
Accession : YP_006162318.1
Strain :
Genome accession: NC_017659
Putative virulence/resistance : Virulence
Product : iron/manganese transport system periplasmic binding protein SitA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 125481 - 126422 bp
Length : 942 bp
Strand : -
Note : Sequence similarity to: YP_001739972.1 iron/manganese transport system periplasmic binding protein SitA [Escherichia coli SMS-3-5]; cd01137, PsaA, Metal binding protein PsaA.

DNA sequence : 
ATGCTCTCAATAAAAAAAGTAACCATGCTCTTGGGGTGCCTAGTCCTCACCTGCTCGATAGCATTTCAGGCGAGTGCAGC
TGAAAAATTCAAGGTCATTACAACTTTTACCATCATCGCAGATATGGCCAAAAACGTGGCTGGAGATGCTGCAGAAGTCT
CATCCATAACCAAGCCTGGTGCAGAAATTCATGAGTATCAGCCTACCCCTGGCGATATTAAACGTGCGCAGGGGGCACAA
CTGATTCTCGCCAATGGTATGAATCTGGAATTGTGGTTCCAACGCTTTTACCAGCATCTCAATGGGGTTCCAGAAGTAAT
TGTCTCTTCGGGTGTGACGCCAGTAGGGATCACCGAAGGGCCCTATGAGGGCAAACCTAACCCCCATGCCTGGATGTCGC
CAGATAATGCTCTGATTTACGTCGATAATATTCGTGATGCGTTTATAAAATACGATCCGGCAAATGCACAAACCTACCAA
CGTAATGCCGATACTTATAAAGCCAAGATTACCCAAACCCTTGCCCCCCTGCGTAAGCAGATTGCGGAACTCCCTGAGAA
TCAGCGATGGATGGTCACCAGTGAAGGGGCTTTTTCTTATCTCGCACGCGATTTGGGGCTAAAAGAGCTTTATCTGTGGC
CGATTAATGCCGATCAACAAGGAACACCGCAGCAGGTACGTAAGGTTGTTGATATAGTTAAGAAAAATCATATCCCGGCA
GTCTTTAGCGAGAGTACGATTTCCGATAAACCAGCGCGTCAGGTTGCGCGTGAAACCGGCGCGCACTACGGTGGTGTGCT
CTATGTCGATTCCCTGAGCACAGAAAACGGCCCGGTACCTACGTATATCGACCTTCTGAAGGTTACTACCAGTACGCTGG
TACAGGGAATTAAAGCGGAAAAAGGGAGAAATAATGATGCAATCTGCAGGCATTGTCGTTAA

Protein sequence : 
MLSIKKVTMLLGCLVLTCSIAFQASAAEKFKVITTFTIIADMAKNVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQ
LILANGMNLELWFQRFYQHLNGVPEVIVSSGVTPVGITEGPYEGKPNPHAWMSPDNALIYVDNIRDAFIKYDPANAQTYQ
RNADTYKAKITQTLAPLRKQIAELPENQRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRKVVDIVKKNHIPA
VFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVPTYIDLLKVTTSTLVQGIKAEKGRNNDAICRHCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-110 77
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 4e-110 75
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 4e-110 75
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 4e-110 75
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-110 75

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_006162318.1 iron/manganese transport system periplasmic binding protein SitA BAC0349 Protein 2e-110 75
sitA YP_006162318.1 iron/manganese transport system periplasmic binding protein SitA BAC0439 Protein 2e-90 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_006162318.1 iron/manganese transport system periplasmic binding protein SitA VFG0525 Protein 2e-110 75