Gene Information

Name : ECO55CA74_26179 (ECO55CA74_26179)
Accession : YP_006162157.1
Strain :
Genome accession: NC_017657
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 47288 - 48118 bp
Length : 831 bp
Strand : +
Note : COG4584 Transposase and inactivated derivatives

DNA sequence : 
ATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGTTTGCCAGAGAACT
GGGGATCTCCCGCAATACAGTTAAACGTTATTTGCAGGCAAAATCTGAGCCGCCAAAATATACGCCGCGACCTGCTGTTG
CTTCACTCCTGGATGAATACCGGGATTATATTCGTCAACGCATCGCCGATGCTCATCCTTACAAAATCCCGGCAACGGTA
ATCGCTCGCGAGATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGGCATTCATTCGTTCTCTCTCGGTTCC
TCAGGAGCAGGAGTCTGCCGTTCGGTTCGAAACTGACCCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTAATG
GTCGCTCACCGCTTCACGTGTTCGTTGCTGTTCTCGGATACAGCCGAATACTGTACATCGAATTCACTGACAATATGCGT
TATGACACGCTGGAGACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTAGTGGGCCGCGCGAAGTGTTGTATGACAATAT
GAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCAGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCAAGG
AGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTACAGTACACC
CGTAACTGTTTTTACATCCCACTGACAGCAGCCACCACAGTTGAAGAACAGCGCCAGTCACGGCGCTACGCGCCATGCCC
GGCGCACATAAAAAAATCCGGAAACGAGTGA

Protein sequence : 
MVTFETVMEIKILHKQGMSSRAFARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATV
IAREIRDQGYRGGMTILRAFIRSLSVPQEQESAVRFETDPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRILYIEFTDNMR
YDTLETCHRNAFRFFGSGPREVLYDNMKTVVLQRDAYQTSQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT
RNCFYIPLTAATTVEEQRQSRRYAPCPAHIKKSGNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec56 AAW51739.1 Aec56 Not tested AGI-3 Protein 8e-99 97
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 5e-116 96
api83 CAF28557.1 transposase Not tested YAPI Protein 5e-116 96
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 4e-116 96
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 7e-116 96
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 4e-116 96
y2411 NP_669718.1 transposase Not tested HPI Protein 7e-116 96
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 4e-116 96
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 7e-116 96
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 4e-116 96
unnamed CAA21403.1 - Not tested HPI Protein 7e-116 96
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 1e-115 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_26179 YP_006162157.1 putative transposase VFG1514 Protein 2e-116 96
ECO55CA74_26179 YP_006162157.1 putative transposase VFG1626 Protein 2e-116 96
ECO55CA74_26179 YP_006162157.1 putative transposase VFG1607 Protein 2e-116 96
ECO55CA74_26179 YP_006162157.1 putative transposase VFG1461 Protein 6e-116 96