Gene Information

Name : ECO55CA74_25929 (ECO55CA74_25929)
Accession : YP_006162107.1
Strain :
Genome accession: NC_017657
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2245 - 3066 bp
Length : 822 bp
Strand : +
Note : -

DNA sequence :
ATGCGATTAGCTTCCCGTTTTGGTCGGTATAATTCCATCCGCCGTGAACGTCCTTTAACGGATGATGAATTAATGCAGTT
CGTGCCTTCGGTATTTTCCGGTGATAAACATGAGTCCCGGAGTGAACGTTATACGTATATTCCAACAATCAATATCATCA
ATAAGTTACGTGATGAAGGTTTCCAGCCATTCTTTGCCTGTCAGAGTCGGGTTCGTGATTTGGGACGTCGCGAATACAGT
AAACATATGTTACGTCTTCGCAGGGAAGGGCATATTAACGGGCAGGAAGTTCCTGAAATTATCCTGCTTAATTCACATGA
TGGTTCATCCAGTTATCAGATGATCCCCGGAATTTTTCGTTTTGTCTGCACAAATGGCCTGGTGTGCGGAAATAATTTTG
GCGAAATCCGCGTTCCACATAAAGGTGATATTGTCGGGCAGGTTATCGAGGGAGCGTATGAAGTACTCGGTGTCTTTGAT
AAGGTCACTGATAATATGGAGGCGATGAAAGAAATTCATCTTAACAGTGACGAGCAACATTTATTTGGCAGAGCTGCACT
GATGGTCAGGTATGAAGATGAAAATAAAACGCCAGTGACGCCTGAACAGATAATTACTCCCCGTCGTCGGGAGAATAAAC
AGAACGATCTCTGGACAACCTGGCAGCGGGCTCAGGAGAACATGATAAAAGGTGGATTATCGGGGCGAAGTGCCTCCGGG
AAAAATACCAGGACAAGAGCCATTACAGGTATTGATGGTGATATAAGAATCAACAAGGCGTTATGGGGGATTGCCGAACA
GTTCAGAAAGTGGAAGTCATGA

Protein sequence :
MRLASRFGRYNSIRRERPLTDDELMQFVPSVFSGDKHESRSERYTYIPTINIINKLRDEGFQPFFACQSRVRDLGRREYS
KHMLRLRREGHINGQEVPEIILLNSHDGSSSYQMIPGIFRFVCTNGLVCGNNFGEIRVPHKGDIVGQVIEGAYEVLGVFD
KVTDNMEAMKEIHLNSDEQHLFGRAALMVRYEDENKTPVTPEQIITPRRRENKQNDLWTTWQRAQENMIKGGLSGRSASG
KNTRTRAITGIDGDIRINKALWGIAEQFRKWKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-82 64
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-80 64
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-81 64
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-81 64
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-81 63
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 8e-83 63
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 1e-82 63
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 8e-83 63
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 1e-82 63
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 6e-83 63
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 1e-82 63
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 3e-85 63
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 5e-81 62
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 5e-81 62
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 6e-81 62
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-81 55
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-78 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_25929 YP_006162107.1 hypothetical protein VFG1526 Protein 8e-83 64
ECO55CA74_25929 YP_006162107.1 hypothetical protein VFG1615 Protein 7e-82 63
ECO55CA74_25929 YP_006162107.1 hypothetical protein VFG0658 Protein 2e-81 62
ECO55CA74_25929 YP_006162107.1 hypothetical protein VFG1676 Protein 4e-81 62