|
Name : ECO55CA74_04830 (ECO55CA74_04830) Accession : YP_006158130.1 Strain : Escherichia coli RM12579 Genome accession: NC_017656 Putative virulence/resistance : Virulence Product : non-LEE encoded effector protein NleB Function : - COG functional category : - COG ID : - EC number : - Position : 1015201 - 1016181 bp Length : 981 bp Strand : + Note : - DNA sequence : ATGCTTTCACCGATAAGGACAACTTTCCATAACTCAGTAAATATAGTGCAGAGTTCACCCTGTCAAACGGTTTCTTTTGC AGGAAAGGAATATGAGTTAAAGGTCATTGATGAAAAAACGCCTATTCTTTTTCAGTGGTTTGAACCTAATCCTGAACGAT ATAAGAAAGATGAGGTTCCAATAGTTAATACTAAGCAGCATCCCTATTTAGATAATGTCACAAATGCGGCAAGGATAGAG AGTGATCGTATGATAGGTATTTTTGTTGATGGCGATTTTTCAGTCAACCAAAAGACTGCTTTTTCAAAATTGGAACGAGA TTTTGAAAATGTAATGATAATCTATCGGGAAGATGTTGACTTCAGTATGTATGACAGAAAACTATCAGATATTTATCATG ATATTATATGTGAACAAAGGTTACGAACTGAAGACAAAAGAGATGAATACTTGTTGAATCTGTTAGAGAAAGAGCTGAGG GAAATTTCAAAGGCGCAGGATTCTTTGATTTCTATGTATGCAAAGAAAAGAAATCATGCATGGTTTGATTTCTTCAGAAA TTTAGCCTTATTAAAAGCAGGAGAGATATTCAGGTGCACATATAATACAAAGAATCACGGTATTTCATTCGGGGAGGGGT GTATCTATCTTGATATGGATATGATACTTACAGGTAAGCTTGGTACAATATATGCTCCTGATGGAATTTCAATGCATGTG GATCGTCGTAATGATAGTGTAAATATTGAAAATAGTGCAATAATTGTTAACCGTAGTAATCATCCTGCTCTACTTGAGGG ACTTTCTTTTATGCATAGTAAAGTAGATGCTCATCCATATTATGATGGTTTGGGGAAAGGAGTTAAGAAATATTTTAATT TTACACCATTACATAATTATAATCATTTTTGTGACTTTATTGAGTTTAACCACCCTAATATAATCATGAACACAAGTCAG TATACATGCAGTTCATGGTAA Protein sequence : MLSPIRTTFHNSVNIVQSSPCQTVSFAGKEYELKVIDEKTPILFQWFEPNPERYKKDEVPIVNTKQHPYLDNVTNAARIE SDRMIGIFVDGDFSVNQKTAFSKLERDFENVMIIYREDVDFSMYDRKLSDIYHDIICEQRLRTEDKRDEYLLNLLEKELR EISKAQDSLISMYAKKRNHAWFDFFRNLALLKAGEIFRCTYNTKNHGISFGEGCIYLDMDMILTGKLGTIYAPDGISMHV DRRNDSVNIENSAIIVNRSNHPALLEGLSFMHSKVDAHPYYDGLGKGVKKYFNFTPLHNYNHFCDFIEFNHPNIIMNTSQ YTCSSW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL57565.1 | unknown | Not tested | LEE | Protein | 1e-98 | 62 |
| st48 | CAC81886.1 | ST48 protein | Not tested | LEE II | Protein | 1e-98 | 62 |
| unnamed | CAI43815.1 | hypothetical protein | Not tested | LEE | Protein | 1e-98 | 62 |
| ECO26_5294 | YP_003232174.1 | T3SS effector NleB | Virulence | LEE | Protein | 1e-98 | 62 |
| ECO111_3725 | YP_003236064.1 | T3SS secreted effector NleB | Virulence | LEE | Protein | 1e-98 | 62 |
| nleB1 | YP_003223426.1 | T3SS effector NleB | Virulence | LEE | Protein | 8e-99 | 62 |
| Z4328 | NP_289553.1 | hypothetical protein | Not tested | OI-122 | Protein | 1e-99 | 62 |
