Gene Information

Name : ECO55CA74_04140 (ECO55CA74_04140)
Accession : YP_006157996.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Unknown
Product : DNA-binding transcriptional activator KdpE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 883182 - 883859 bp
Length : 678 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
GTGACAAACGTTCTGATTGTTGAAGATGAACAGGCTATTCGTCGCTTTCTGCGCACGGCGCTGGAGGGCGACGGGATGCG
CGTCTATGAGGCCGAAACGCTGCAACGCGGCTTGCTGGAAGCGGCTACCCGTAAGCCAGATTTGATTATTCTCGATCTCG
GCCTGCCCGATGGTGATGGGATTGAGTTTATCCGCGACCTGCGCCAGTGGAGCGCGGTGCCGGTGATTGTGCTTTCCGCA
CGCAGCGAAGAGAGCGACAAAATCGCCGCGCTGGATGCCGGAGCGGATGATTATCTAAGTAAGCCGTTTGGCATTGGCGA
ATTGCAGGCCCGTCTGCGCGTCGCTTTACGCCGCCACTCCGCCACCGCCGCGCCCGATCCGCTGGTGAAATTTTCCGATG
TTACCGTCGATTTAGCCGCCCGCGTGATTCACCGGGGTGAGGAAGAGGTGCATCTCACCCCGATTGAGTTTCGCCTGCTG
GCAGTGCTGCTCAACAACGCCGGAAAAGTGCTCACCCAGCGCCAACTCCTTAACCAGGTGTGGGGGCCAAACGCGGTCGA
ACACAGTCATTATTTGCGTATTTATATGGGACATCTGCGACAAAAACTGGAACAGGATCCCGCTCGCCCCAGCCATTTCA
TTACTGAAACCGGTATTGGTTATCGGTTTATGCTTTGA

Protein sequence :
MTNVLIVEDEQAIRRFLRTALEGDGMRVYEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSA
RSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATAAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLL
AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPSHFITETGIGYRFML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 4e-25 43
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 1e-24 42
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 7e-25 42
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 1e-24 42
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 1e-24 42
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 1e-24 42