Gene Information

Name : ECO55CA74_21330 (ECO55CA74_21330)
Accession : YP_006161371.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4418685 - 4419503 bp
Length : 819 bp
Strand : +
Note : COG3204 Uncharacterized protein conserved in bacteria

DNA sequence : 
ATGAAAAGAAAACCATTAATTGCATTTTTCATTGCGATATTTATTGCACTAACCATATTAATATTATTTCCATTTAATTG
TACTTACAAAAAATCACCTCAAGAACACTCACTTTCATTTATAAAACAATTACCAAATACGGTGAACTTATCATCTCTTA
CTTATAATAAAGAGGATGATTTCCTGTATGCCACCCAGAATAGCCCTGCACAGCTACTTAAAATAACCAAAAGTGGCGAC
ATCATGGACAGAGCCCCACTGCCTTTTATCTCTGATGCCGAAACAATTGAACACATACAAGGGAACATTTTTGCTGCAGT
AGACGAAAAGACTTCTGAACTATTCTTTTTTACAGTTACAAAAGATATGCATATCTCCTTTCGAAATAAAATTCAGTTAG
AAAAATTCAATAAAAAGAATAGAGGGTTTGAAGGGCTGGCATGGAAAGCAGATGATCGGATGCTGTTTGTCGCAAAAGAA
AGACGCCCAAGTAAAATATTTATATATCAACTTTCTCCAGACCTGCTGAGTGTAAAGCAAGCAACTATTCCAGAGGCACT
AAATGATATACGTGTTAACGATATATCCGGCCTGGCCTTTAATAATGAAAGTCTGATGATTCTGTCCGATGAATCGCGTA
AATTACTCAAGTTTAACCTGACAGAGATGTCTTTCATTGAGATGCTTGACCTGACAAAAGGAAATCATTCTCTGACCAGT
GATTTGCCCCAACCTGAAGGAATTGTAACTCTGCCTGATGAAAGCATTTATGTTGCCAGTGAACCTGATATCCTCGCGAA
ATTTGTCCCTAATAAGTAA

Protein sequence : 
MKRKPLIAFFIAIFIALTILILFPFNCTYKKSPQEHSLSFIKQLPNTVNLSSLTYNKEDDFLYATQNSPAQLLKITKSGD
IMDRAPLPFISDAETIEHIQGNIFAAVDEKTSELFFFTVTKDMHISFRNKIQLEKFNKKNRGFEGLAWKADDRMLFVAKE
RRPSKIFIYQLSPDLLSVKQATIPEALNDIRVNDISGLAFNNESLMILSDESRKLLKFNLTEMSFIEMLDLTKGNHSLTS
DLPQPEGIVTLPDESIYVASEPDILAKFVPNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC31535.1 L0056 Not tested LEE Protein 4e-113 100
ECs4591 NP_312618.1 hypothetical protein Not tested LEE Protein 5e-113 100
unnamed ACU09480.1 hypothetical protein Not tested LEE Protein 4e-113 100
Z5143 NP_290290.1 hypothetical protein Not tested LEE Protein 5e-113 100
rorf1 AAC38362.1 rOrf1 Not tested LEE Protein 1e-112 99
ECO111_3730 YP_003236066.1 hypothetical protein Not tested LEE Protein 7e-111 98
unnamed AAL57582.1 unknown Not tested LEE Protein 4e-103 91
ECO103_3640 YP_003223497.1 T3SS component Virulence LEE Protein 4e-103 91
unnamed CAI43896.1 hypothetical protein Not tested LEE Protein 3e-103 91
unnamed AAL57521.1 unknown Not tested LEE Protein 1e-102 90
unnamed AAK26694.1 unknown Not tested LEE Protein 9e-103 90
st03 CAC81841.1 ST03 protein Not tested LEE II Protein 9e-103 90
ECO26_5249 YP_003232131.1 hypothetical protein Not tested LEE Protein 1e-102 90
unnamed AAL06388.1 unknown Not tested LEE Protein 1e-98 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_21330 YP_006161371.1 hypothetical protein VFG0834 Protein 2e-113 100
ECO55CA74_21330 YP_006161371.1 hypothetical protein VFG0708 Protein 7e-113 99