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Name : ECO55CA74_21315 (ECO55CA74_21315) Accession : YP_006161368.1 Strain : Escherichia coli RM12579 Genome accession: NC_017656 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4415739 - 4416128 bp Length : 390 bp Strand : - Note : COG2916 DNA-binding protein H-NS DNA sequence : ATGCGGAGATTATTTATTATGAATATGGAAAATAATTCACATACAACAAGTCCATACATTCAGCTTATAGAGCAAATTGC AGTTCTACAGCAGGAAGCAAAGCGACTGCGAGAGCAGGAAGTTCAAAGTGTAATTGAGTCGATTCAGAAGCAGATTACTT ATTACAATATAACCTTACAAGAGCTGGGATATACTAATGTGCCTGATGATGGACTCGCTCGCCGGAACTCATCGAAAGGT GTTTACTACCGCAATGAAGAAGGGCAGACCTGGTCGGGCGTAGGCCGACAGCCACGCTGGCTTAAAGAAGCACTGTTGAA TGGAATGAAGAAAGAAGATTTTCTTGTGAAGGACACTGAAGAAGAAATAATACCGCTGAAAAATATTTAA Protein sequence : MRRLFIMNMENNSHTTSPYIQLIEQIAVLQQEAKRLREQEVQSVIESIQKQITYYNITLQELGYTNVPDDGLARRNSSKG VYYRNEEGQTWSGVGRQPRWLKEALLNGMKKEDFLVKDTEEEIIPLKNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ler | ACU09478.1 | transcription regulator Ler | Not tested | LEE | Protein | 4e-56 | 100 |
| Z5140 | NP_290288.1 | hypothetical protein | Not tested | LEE | Protein | 6e-56 | 100 |
| ECs4588 | NP_312615.1 | hypothetical protein | Virulence | LEE | Protein | 6e-56 | 100 |
| unnamed | AAC31533.1 | L0054 | Not tested | LEE | Protein | 4e-56 | 100 |
| ler | YP_003236108.1 | transcriptional regulator Ler | Not tested | LEE | Protein | 8e-56 | 99 |
| unnamed | AAC38364.1 | Orf1 | Virulence | LEE | Protein | 5e-56 | 99 |
| ler | YP_003223495.1 | transcription regulator Ler | Not tested | LEE | Protein | 2e-55 | 97 |
| ler | AAK26696.1 | Ler | Virulence | LEE | Protein | 2e-55 | 97 |
| ler | YP_003232133.1 | transcriptional regulator Ler | Not tested | LEE | Protein | 2e-55 | 97 |
| ler | AAL57523.1 | Ler | Virulence | LEE | Protein | 2e-55 | 97 |
| ler | AAL57584.1 | Ler | Virulence | LEE | Protein | 2e-55 | 97 |
| ler | CAC81843.1 | Ler protein | Not tested | LEE II | Protein | 2e-55 | 97 |
| unnamed | AAL06349.1 | LEE-encoded regulator | Virulence | LEE | Protein | 4e-52 | 90 |
| ler | CAI43893.1 | LEE encoded regulator | Virulence | LEE | Protein | 7e-41 | 86 |
| ler | AFO66332.1 | locus of enterocyte effacement-encoded regulator | Virulence | SESS LEE | Protein | 3e-36 | 65 |
| ler | AFO66395.1 | locus of enterocyte effacement (LEE)-encoded regulator | Virulence | SESS LEE | Protein | 3e-36 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO55CA74_21315 | YP_006161368.1 | hypothetical protein | VFG0832 | Protein | 2e-56 | 100 |
| ECO55CA74_21315 | YP_006161368.1 | hypothetical protein | VFG0710 | Protein | 2e-56 | 99 |
