Gene Information

Name : ECO55CA74_21305 (ECO55CA74_21305)
Accession : YP_006161366.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4415179 - 4415502 bp
Length : 324 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTATTGTGAGCCAAACAAGAAATAAAGAACTATTAGATAAAAAAATAAGATCAGAAATTGAGGCGATAAAAAAAAT
AATCGCCGAATTTGATGTCGTAAAAGAAAGCGTTAATGAGTTAAGTGAAAAAGCAAAAACAGATCCTCAGGCGGCAGAAA
AATTAAACAAATTAATTGAGGGGTACACATATGGTGAAGAGCGAAAATTATATGATTCTGCCCTAAGTAAGATTGAAAAA
CTAATAGAGACACTGAGTCCAGCAAGATCTAAAAGCCAATCAACAATGAATCAACGGAATAGAAATAATAGAAAAATAGT
ATGA

Protein sequence : 
MSIVSQTRNKELLDKKIRSEIEAIKKIIAEFDVVKESVNELSEKAKTDPQAAEKLNKLIEGYTYGEERKLYDSALSKIEK
LIETLSPARSKSQSTMNQRNRNNRKIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC38366.1 Orf3 Not tested LEE Protein 4e-34 100
unnamed AAC31531.1 L0052 Not tested LEE Protein 4e-34 100
ECO111_3770 YP_003236106.1 T3SS component Virulence LEE Protein 5e-34 100
Z5138 NP_290286.1 hypothetical protein Not tested LEE Protein 5e-34 100
ECs4586 NP_312613.1 hypothetical protein Not tested LEE Protein 5e-34 100
unnamed ACU09476.1 conserved hypothetical protein Not tested LEE Protein 6e-34 99
ECO103_3636 YP_003223493.1 T3SS component Virulence LEE Protein 2e-29 90
ECO26_5253 YP_003232135.1 T3SS component Virulence LEE Protein 2e-29 90
unnamed AAL06351.1 unknown Not tested LEE Protein 5e-28 85
cesA AFO66338.1 hypothetical protein Not tested SESS LEE Protein 6e-11 50
cesA AFO66397.1 hypothetical protein; possible LEE-encoded type III secretion system factor Not tested SESS LEE Protein 6e-11 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_21305 YP_006161366.1 hypothetical protein VFG0712 Protein 2e-34 100
ECO55CA74_21305 YP_006161366.1 hypothetical protein VFG0830 Protein 2e-34 100