Gene Information

Name : ECO55CA74_21295 (ECO55CA74_21295)
Accession : YP_006161364.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4413943 - 4414638 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence :
ATGATTTATTTCTTAACAGACTTAATAAAATTTTATTGCCTTATGAAACTTTATGAATTTAAAAATATAAAAATTGATTT
AGTGCTTACAGAAGATATCATACCAGAGGATAAGTTACAGGAAATTATTCAATCTGATGATATTATCAAACTGGCTCGAA
AAAAAACATATGAACATTTACTGAGGGCGAGGAGGAAATCGAAAGAATTAAAGACAGAATCCAGAAAAAAAATTGCCAGA
AAAATGATTCTAATGAGAGAAAGGATTCGAAAAAATAATAAAATAAAATTAGATAAAGAGGTTAACCAATCGATAAAATG
GGTTAAAGATATCCAGGCTATCGAGTTGGTCTTAATGCAGGACATAATGAATAAGATTCATTTGTCACTGACTAATGCAT
TACATTCTTTAGATACATCATCAAGAATTAATTGGGATGATTTACTTAATGAAGTTGTAAGGGAAACTCTATCTAATAAC
AATATTGTCGGAGCTATTAAGATCACTAAAAACCCAGACATTAAACTTGATCCTGGCGAGGCCAACAATATACAGCTTAT
TAATGATGCAAACACACCGCATAATAAAATTATAATAGAAAATGAATATATTAGAATAACTTTAGACCCATTAGAGCAAA
TAAGTATTTTATTGAATTCATTTAAAGATAATTATCTTAGCATTATTCAGGAATGA

Protein sequence :
MIYFLTDLIKFYCLMKLYEFKNIKIDLVLTEDIIPEDKLQEIIQSDDIIKLARKKTYEHLLRARRKSKELKTESRKKIAR
KMILMRERIRKNNKIKLDKEVNQSIKWVKDIQAIELVLMQDIMNKIHLSLTNALHSLDTSSRINWDDLLNEVVRETLSNN
NIVGAIKITKNPDIKLDPGEANNIQLINDANTPHNKIIIENEYIRITLDPLEQISILLNSFKDNYLSIIQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC31529.1 L0050 Not tested LEE Protein 6e-102 100
unnamed ACU09474.1 conserved hypothetical protein Not tested LEE Protein 1e-93 100
ECs4584 NP_312611.1 hypothetical protein Not tested LEE Protein 8e-102 100
unnamed AAC38368.1 Orf5 Not tested LEE Protein 3e-100 99
Z5136 NP_290284.1 hypothetical protein Not tested LEE Protein 6e-87 99
ECO111_3768 YP_003236104.1 T3SS component Virulence LEE Protein 2e-101 99
unnamed CAI43890.1 hypothetical protein Not tested LEE Protein 4e-94 92
unnamed AAK26699.1 unknown Not tested LEE Protein 4e-94 92
unnamed AAL57526.1 unknown Not tested LEE Protein 4e-94 92
ECO26_5255 YP_003232137.1 T3SS component Virulence LEE Protein 8e-94 92
unnamed AAL57587.1 unknown Not tested LEE Protein 4e-94 92
st08 CAC81846.1 ST08 protein Not tested LEE II Protein 4e-94 92
ECO103_3634 YP_003223491.1 T3SS component Virulence LEE Protein 1e-93 91
unnamed AAL06353.1 unknown Not tested LEE Protein 6e-84 77
escL AFO66316.1 putative LEE-encoded putative type III secretion system factor Virulence SESS LEE Protein 4e-44 45
escL AFO66399.1 putative LEE-encoded putative type III secretion system factor Not tested SESS LEE Protein 2e-45 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_21295 YP_006161364.1 hypothetical protein VFG0714 Protein 2e-100 99
ECO55CA74_21295 YP_006161364.1 hypothetical protein VFG0828 Protein 2e-87 99