Gene Information

Name : ECO55CA74_21245 (ECO55CA74_21245)
Accession : YP_006161354.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : protein EscJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4406296 - 4406868 bp
Length : 573 bp
Strand : +
Note : COG4669 Type III secretory pathway, lipoprotein EscJ

DNA sequence : 
ATGAAAAAACACATTAAAAACCTTTTTTTATTGGCTGCTATTTGTTTGACAGTGGCATGTAAAGAGCAATTGTATACAGG
ATTAACAGAAAAAGAAGCTAATCAGATGCAAGCACTGTTGCTATCCAATGATGTCAATGTTTCCAAAGAAATGGACAAAA
GTGGAAATATGACACTCAGTGTGGAAAAAGAGGATTTTGTTCGCGCAATAACGATTTTAAATAATAACGGCTTCCCGAAA
AAGAAATTTGCAGATATCGAGGTTATTTTCCCACCTAGCCAGTTAGTGGCATCGCCATCACAAGAAAATGCAAAAATCAA
CTATCTCAAAGAACAAGACATCGAAAGGTTGCTAAGTAAAATACCTGGTGTTATCGATTGCAGCGTTTCATTAAATGTTA
ACAATAACGAAAGTCAACCATCCTCAGCAGCCGTTTTAGTCATCAGCTCGCCAGAGGTTAACTTAGCACCATCGGTCATT
CAGATAAAAAACCTAGTTAAGAATAGTGTTGACGATCTCAAATTAGAAAATATTAGTGTTGTTATCAAGTCATCCTCAGG
ACAGGACGGGTAA

Protein sequence : 
MKKHIKNLFLLAAICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLSVEKEDFVRAITILNNNGFPK
KKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSKIPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVI
QIKNLVKNSVDDLKLENISVVIKSSSGQDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escJ YP_003236093.1 T3SS structure protein EscJ Virulence LEE Protein 2e-82 100
escJ NP_290273.1 hypothetical protein Virulence LEE Protein 2e-82 100
escJ AAC38379.1 EscJ Virulence LEE Protein 1e-82 100
ECs4573 NP_312600.1 EscJ Virulence LEE Protein 2e-82 100
escJ AAC31518.1 L0039 Virulence LEE Protein 1e-82 100
escJ ACU09463.1 EscJ protein Virulence LEE Protein 1e-82 100
escJ AAL57537.1 EscJ Virulence LEE Protein 5e-78 96
escJ YP_003223480.1 T3SS structure protein EscJ Virulence LEE Protein 7e-78 96
escJ CAC81857.1 EscJ protein Virulence LEE II Protein 5e-78 96
escJ YP_003232148.1 T3SS structure protein EscJ Virulence LEE Protein 7e-78 96
escJ CAI43879.1 EscJ protein Virulence LEE Protein 5e-78 96
unnamed AAL06364.1 EscJ Virulence LEE Protein 1e-78 96
escJ AAK26710.1 EscJ Virulence LEE Protein 5e-78 96
escJ AFO66320.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 8e-61 66
escJ AFO66410.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 8e-61 66
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 1e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_21245 YP_006161354.1 protein EscJ VFG0725 Protein 5e-83 100
ECO55CA74_21245 YP_006161354.1 protein EscJ VFG0817 Protein 5e-83 100