|
Name : ECO55CA74_21215 (ECO55CA74_21215) Accession : YP_006161348.1 Strain : Escherichia coli RM12579 Genome accession: NC_017656 Putative virulence/resistance : Virulence Product : sepQ Function : - COG functional category : - COG ID : - EC number : - Position : 4399980 - 4400897 bp Length : 918 bp Strand : - Note : - DNA sequence : ATGAAGCCATTGAGTTCACAATTGAATATGAAAATTAACGATTTTTATTTGCCGTTGTTGCCAGTTATCGGAACCGGTCG CCTCTATATTACGTCCAAAGGTCATGCTTGCCATGCATATTTTCGTGAGGTCAGCGGTCATGGTATTCGTTTCACGTTGA CATACTCGGGCTATGAGGGGCGTTTCTGGATATCAGAAGAACAGTTCATTCAGTGGTGCCAAGAGTTATTCCCGTATAGC GAAAGCCGGCTGATACCGGAAGATACGATAAAACTCATGATCTTATGGGTAATGCAGACTGCCTTACCGGAAGGTGATGT GTCAGTTGATGATGTTCAATTTACGATGCTAAATAAAGATATTTATCCGGTAATAGAAAATAATAATGGAGAAAACAGAC TTAATGTAATTATACTCGAAACAACGGTACAAAGTTTACAATATCTGATTAATGATAATTGGCAATTTGTTCCACATTCT AATGCTCTTTTTTTTGATGGCTATATCGTACCTGGGTGGACTGATTATCCAGTTACAGAGTTGAGAGTTGGTGATAGTCT GAGACTCTATCATGTTGATGATAGTCAAGAGAGAAGGTGCTGGATTGTTATTAATACCCCTTTAGCAACAGTAAATCTGA GTGATAATAATTTATCTGTCACGGATGTTCTGGCTGCGGATCTGTTATCTGCTCTTAGCAATGAGACTGTCATGAATCGC ATTTATTGTGCGATCGGTACAGTCCATATTGATATACACATGTTGCGTAATGTTAAAAAAGATGACATTATTAATTCAGA TGGATACCATCTTTTTGGTGGTTGTCAGTTAATACGCAATAATACGACGATAGCATACGGGAGTATTGTAAAAATCAACG AAGATTTTTATTTTACTGTTAGCATAGTATGTGATTAA Protein sequence : MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEGRFWISEEQFIQWCQELFPYS ESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKDIYPVIENNNGENRLNVIILETTVQSLQYLINDNWQFVPHS NALFFDGYIVPGWTDYPVTELRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVLAADLLSALSNETVMNR IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTVSIVCD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sepQ | AAC31510.1 | L0031 | Virulence | LEE | Protein | 3e-136 | 99 |
| sepQ | NP_290265.1 | hypothetical protein | Virulence | LEE | Protein | 4e-136 | 99 |
| sepQ | ACU09455.1 | SepQ protein | Virulence | LEE | Protein | 3e-136 | 99 |
| ECs4565 | NP_312592.1 | SepQ | Virulence | LEE | Protein | 4e-136 | 99 |
| sepQ | AAC38386.1 | SepQ | Virulence | LEE | Protein | 1e-132 | 94 |
| sepQ | YP_003236085.1 | T3SS structure protein SepQ | Virulence | LEE | Protein | 9e-132 | 92 |
| sepQ | CAC81865.1 | SepQ protein | Not tested | LEE II | Protein | 3e-125 | 88 |
| sepQ | YP_003232156.1 | T3SS structure protein SepQ | Virulence | LEE | Protein | 4e-125 | 88 |
| sepQ | CAI43871.1 | SepQ protein | Virulence | LEE | Protein | 2e-125 | 88 |
| sepQ | YP_003223472.1 | T3SS structure protein SepQ | Virulence | LEE | Protein | 3e-125 | 88 |
| sepQ | AAK26718.1 | SepQ | Virulence | LEE | Protein | 7e-124 | 87 |
| sepQ | AAL57545.1 | SepQ | Virulence | LEE | Protein | 7e-124 | 87 |
| unnamed | AAL06372.1 | SepQ | Virulence | LEE | Protein | 3e-118 | 82 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO55CA74_21215 | YP_006161348.1 | sepQ | VFG0809 | Protein | 2e-136 | 99 |
| ECO55CA74_21215 | YP_006161348.1 | sepQ | VFG0733 | Protein | 8e-133 | 94 |
