Gene Information

Name : ECO55CA74_21205 (ECO55CA74_21205)
Accession : YP_006161346.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4398862 - 4399245 bp
Length : 384 bp
Strand : +
Note : -

DNA sequence : 
ATGAATGAGAAATTTCGCACAGACCTTGCACATACGTTTGGGATAGCTCTTGAAGAGCAAACTGACGTGCTCTCTTTCCA
CGATAACGATGGCCATGAATGGATACTGGAGTGTGCATCTCAATCTGAAATTCTGTTTTTTTATTGTTATTTATTGAATA
GCGAATCAATACAGATTAATTCAATACTTGAAATGAATAGCAATCGAGAACTGCTCGGTATGTTTTTCCTGTCATTAAAA
GATGACAACATTCTTTTAAATATTGCATTTCCTGCAGATAAAATTGATATTACAGAGTTTGCTAATTTAATGGAAAATGG
TTATCTATTAAAGAATGAGATAATTAGATCCTTGTCTTCCAGACCTACAGATTTTTTACCTTGA

Protein sequence : 
MNEKFRTDLAHTFGIALEEQTDVLSFHDNDGHEWILECASQSEILFFYCYLLNSESIQINSILEMNSNRELLGMFFLSLK
DDNILLNIAFPADKIDITEFANLMENGYLLKNEIIRSLSSRPTDFLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC31508.1 L0029 Not tested LEE Protein 2e-53 100
Z5114 NP_290263.1 hypothetical protein Not tested LEE Protein 3e-53 100
unnamed ACU09453.1 hypothetical protein Not tested LEE Protein 2e-53 100
ECs4563 NP_312590.1 hypothetical protein Not tested LEE Protein 3e-53 100
unnamed AAK26720.1 unknown Not tested LEE Protein 2e-43 80
unnamed AAL57547.1 unknown Not tested LEE Protein 2e-43 80
st29 CAC81867.1 ST29 protein Not tested LEE II Protein 2e-43 80
cesF YP_003232158.1 T3SS chaperone CesF Virulence LEE Protein 2e-43 80
unnamed CAI43869.1 hypothetical protein Not tested LEE Protein 4e-43 79
cesF YP_003223470.1 chaperone CesF Not tested LEE Protein 6e-43 79
unnamed AAC38388.1 rOrf10 Not tested LEE Protein 5e-41 79
cesF YP_003236083.1 chaperone CesF Not tested LEE Protein 4e-41 79
unnamed AAL06374.1 unknown Not tested LEE Protein 1e-40 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_21205 YP_006161346.1 hypothetical protein VFG0807 Protein 8e-54 100
ECO55CA74_21205 YP_006161346.1 hypothetical protein VFG0735 Protein 2e-41 79