Name : ECO55CA74_21195 (ECO55CA74_21195) Accession : YP_006161344.1 Strain : Escherichia coli RM12579 Genome accession: NC_017656 Putative virulence/resistance : Virulence Product : translocated intimin receptor Tir Function : - COG functional category : - COG ID : - EC number : - Position : 4395873 - 4397561 bp Length : 1689 bp Strand : - Note : - DNA sequence : ATGCCTATTGGTAATCTTGGTCATAATCCCAATGTGAATAATTCAATTCCTCCTGCACCTCCATTACCTTCACAAACCGA CGGTGCAGGGGGGCGTGGTCAGCTCATTAACTCTACGGGGCCGTTGGGATCTCGTGCGCTATTTACGCCTGTAAGGAATT CTATGGCTGATTCTGGCGACAATCGTGCCAGTGATGTTCCTGGACTTCCTGTAAATCCGATGCGCCTGGCGGCGTCTGAG ATAACACTGAATGATGGATTTGAAGTTCTTCATGATCATGGTCCGCTCGATACTCTTAACAGGCAGATTGGCTCTTCGGT ATTTCGAGTTGAAACTCAGGAAGATGGTAAACATATTGCTGTCGGTCAGAGGAATGGTGTTGAGACCTCTGTTGTTTTAA GTGATCAAGAGTACGCTCGCTTGCAGTCCATTGATCCTGAAGGTAAAGACAAATTTGTATTTACTGGAGGCCGTGGTGGT GCTGGGCATGCTATGGTCACCGTTGCTTCAGATATCACGGAAGCCCGCCAAAGGATACTGGAGCTGTTAGAGCCCAAAGG GACCGGGGAGTCCAAAGGTGCTGGGGAGTCCAAAGGTGCTGGGGAGTCAAAAGGCGTTGGGGAGTTGAGGGAGTCAAATA GCGGTGCGGAAAACACCACAGAAACTCAGACCTCAACCTCAACTTCCAGCCTTCGTTCAGATCCTAAACTTTGGTTGGCG TTGGGGACTGTTGCTACAGGTCTGATAGGGTTGGCGGCGACGGGTATTGTACAGGCGCTTGCATTGACGCCGGAGCCGGA TAGCCCAACCACGACCGACCCTGATGCAGCTGCAAGTGCAACTGAAACTGCGACAAGAGATCAGTTAACGAAAGAAGCGT TCCAGAACCCAGATAATCAAAAAGTTAATATCGATGAGCTCGGAAATGCGATTCCGTCAGGGGTATTGAAAGATGATGTT GTTGCGAATATAGAAGAGCAGGCTAAAGCAGCAGGCGAAGAGGCCAAACAGCAAGCCATTGAAAATAATGCTCAGGCGCA AAAAAAATATGATGAACAACAAGCTAAACGCCAGGAGGAGCTGAAAGTTTCATCGGGGGCTGGCTACGGTCTTAGTGGCG CATTGATTCTTGGTGGGGGAATTGGTGTTGCCGTCACCGCTGCGCTTCATCGAAAAAATCAGCCGGTAGAACAAACAACA ACAACAACTACTACAACTACAAGCGCACGTACGGTAGAGAATAAGCCTGCAAATAATACACCTGCACAGGGCAATGTAGA TACCCCTGGGTCAGAAGATACCATGGAGAGCAGACGTAGCTCGATGGCTAGCACCTCGTCGACTTTCTTTGACACTTCCA GCATAGGGACCGTGCAGAATCCGTATGCTGATGTTAAAACATCGCTGCATGATTCGCAGGTGCCGACTTCTAATTCTAAT ACGTCTGTTCAGAATATGGGGAATACAGATTCTGTTGTATATAGCACCATTCAACATCCTCCCCGGGATACTACTGATAA CGGCGCACGGTTATTAGGAAATCCAAGTGCGGGGATTCAAAGCACTTATGCGCGTCTGGCGCTAAGTGGTGGATTACGCC ATGACATGGGAGGATTAACGGGGGGGAGTAATAGCGCTGTGAATACTTCGAATAACCCACCAGCGCCGGGATCCCATCGT TTCGTCTAA Protein sequence : MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGDNRASDVPGLPVNPMRLAASE ITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIAVGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGG AGHAMVTVASDITEARQRILELLEPKGTGESKGAGESKGAGESKGVGELRESNSGAENTTETQTSTSTSSLRSDPKLWLA LGTVATGLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKVNIDELGNAIPSGVLKDDV VANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELKVSSGAGYGLSGALILGGGIGVAVTAALHRKNQPVEQTT TTTTTTTSARTVENKPANNTPAQGNVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSN TSVQNMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGGSNSAVNTSNNPPAPGSHR FV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tir | AAC31506.1 | L0027 | Virulence | LEE | Protein | 0.0 | 99 |
tir | AAY25390.1 | translocated intimin receptor | Virulence | LEE | Protein | 0.0 | 99 |
tir | AAY25391.1 | translocated intimin receptor | Virulence | LEE | Protein | 0.0 | 99 |
tir | AAY25392.1 | translocated intimin receptor | Virulence | LEE | Protein | 0.0 | 99 |
tir | ACU09451.1 | translocated intimin receptor protein Tir | Virulence | LEE | Protein | 0.0 | 99 |
tir | NP_290261.1 | translocated intimin receptor protein | Not tested | LEE | Protein | 0.0 | 99 |
ECs4561 | NP_312588.1 | hypothetical protein | Virulence | LEE | Protein | 0.0 | 99 |
tir | YP_003223468.1 | translocated intimin receptor Tir | Virulence | LEE | Protein | 1e-113 | 65 |
tir | CAI43867.1 | translocated intimin receptor | Not tested | LEE | Protein | 1e-113 | 65 |
tir | YP_003232160.1 | translocated intimin receptor Tir | Virulence | LEE | Protein | 7e-116 | 65 |
tir | AAK26722.1 | Tir | Virulence | LEE | Protein | 2e-115 | 65 |
tir | AAL57549.1 | Tir | Virulence | LEE | Protein | 2e-115 | 65 |
espE | CAC81869.1 | EspE protein | Virulence | LEE II | Protein | 5e-116 | 65 |
tir | AAC38390.1 | Tir | Virulence | LEE | Protein | 5e-86 | 60 |
tir | AAY25394.1 | translocated intimin receptor | Virulence | LEE | Protein | 2e-81 | 60 |
tir | YP_003236081.1 | putative translocated intimin receptor Tir | Not tested | LEE | Protein | 1e-81 | 59 |
tir | AAY25393.1 | translocated intimin receptor | Virulence | LEE | Protein | 3e-81 | 59 |
tir | AAY25395.1 | translocated intimin receptor | Virulence | LEE | Protein | 3e-81 | 59 |
unnamed | AAL06376.1 | translocated intimin receptor Tir | Virulence | LEE | Protein | 1e-79 | 58 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
ECO55CA74_21195 | YP_006161344.1 | translocated intimin receptor Tir | VFG0805 | Protein | 0.0 | 99 |
ECO55CA74_21195 | YP_006161344.1 | translocated intimin receptor Tir | VFG0737 | Protein | 3e-86 | 60 |