|
Name : ECO55CA74_17575 (ECO55CA74_17575) Accession : YP_006160631.1 Strain : Escherichia coli RM12579 Genome accession: NC_017656 Putative virulence/resistance : Virulence Product : lipoprotein acfD-like protein precursor Function : - COG functional category : - COG ID : - EC number : - Position : 3645950 - 3650377 bp Length : 4428 bp Strand : - Note : - DNA sequence : TTGCCGGAAGTGAAACCTGATCCAACACCAAACCCGGAGCCGACGCCTGAGCCAACGCCGGACCCAGAGCCTACGCCAGA ACCGACACCTGATCCTGAACCAACACCAGAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACCCTGGGCG GAAGCCAGCGGGTAACTGGTGCTACCTGTAATGGTGAATCCAGCGATGGCTTTACATTTAAACCTGGCGAGGACGTTACT TGCGTGGCGGGTAACACGACAATTGCCACCTTCAACACTCAGTCAGAAGCTGCGCGTAGCCTGCGTGCGGTTGAAAAAGT GTCGTTTAGTCTTGAGGACGCGCAAGAACTGGCGGCTTCCGACAATAAGAAAAGCAATGCGGTTTCGCTGGTAACGTCCA GTAACAGCTGTCCGGCGGATACAGAACAGGTTTGCCTGGAGTTCTCCTCAGTGATCGAGAGTAAACGCTTCGACTCGCTG TATAAGCAAATCGATCTGGCACCGGAAGAGTTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCCGCGACCGATAA AGCGCCATCCACTCATACTTCACCGGTCGTGCCCGCCACCACTCCGGGAACAAAACCGGATCTAAACGCTTCCTTCGTGT CGGCTAACGCGGAACAGTTTTATCAGTATCAACCTACTGAAATTATTCGCTCCGAAGGCCGACTGGTAGATAGCCAGGGA TATGGTGTTGCTGGCGTCAACTACTACACCAATTCAGGCCGTGGCGTGACAGGGGAAAATGGTGAATTTTCCTTTAGCTG GGGCGAAACCATCTCCTTTGGTATCGATACCTTTGAACTGGGGTCAGTGCGCGGCAATAAGTCGACCATTGCATTGACTG AACTGGGTGATGAAGTTCGCGGGGCGAATATCGATCAGCTTATTCATCGCTATTCGACGACCAGGCAAAATAATACCCGT GTTGTGCCGGACGATGTACGCAAGGTCTTTGCCGAATATCCCAACGTGATCAACGAGATTATCAATCTCTCGTTATCCAA CGGTGCGACGCTGGATGAAGGTGAGCAAGTTGTTAATCTGCCAAACGAATTTATTGAGCAGTTTAATACGGGTCAGGCCA AAGAGATCGATACCGCGATTTGTGCGAAAACCGACGGTTGTAACGAGGTTCGCTGGTTCTCGCTGACGACGCGCAATGTT AATGACGGCCAGATTCAGGGCGTTATTAACAAGCTGTGGGGTGTGGATGAAGATTACAAATCGGTGACGAAATTCCACGT CTTTCATGACTCTACCAACTTCTATGGTAGCACCGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAACGCGGCAT TCCCGATTCTGATGGCGCGTAATGATAAAAACTACTGGCTGGCCTTCGGCGAAAAACGCGCCTGGGATAAAAATGAGCTG GCGTACATTACTGAAGCGCCTTCCATTGTGCAACCTGAGAACGTGACACGCGAAACTGCGACCTTCAACCTGCCGTTTAT CTCGCTGGGGCAAGTCGGCAAAGGCAAGCTGATGGTTATCGGTAACCCGCACTACAACAGCATTTTGCGTTGCCCGAACG GTTACAGCTGGAACGGGAGCGTTAATAAAGACGGACAGTGTACGCTCAACAGCGACTCGGATGACATGAAGAACTTCATG GAGAACGTGTTGCGCTATCTGTCAAATGATCGCTGGTTGCCGGATGCAAAATCCAATATGACCGTGGGTACTAACCTGGA CACGGTGTATTTCAAAAAACACGGGCAGGTTACAGGAAACAGTGCTGCGTTTGGCTTCCATCCGGATTTTGCGGGTATCT CTGTTGAGCATTTAAGTAGCTATGGCGATCTCGATCCGCAGGACATGCCACTGCTGATCCTCAACGGCTTTGAGTATGTG ACTCAGGTTGGGGGCGATCCCTATGCAGTGCCTCTGCGTGCAGATACCAGCAAACCGAAGCTGACCCAGCAGGATGTGAC CGATCTGATCGCCTATCTGAACAAAGGTGGCTCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCG CGTCTGGCTTTGTGCGTCTGCTGGATGCCGCAGGCCTGTCAATGGCACTGAACAAGTCGGTGGTGAATAACGATCCGCAG GGGTATCCGGATCGCGTACGCCAACAACGCGCAACGGGTATTTGGGTCTATGAACGTTATCCGTTTGTTGATGGTAAACC GCCGTATACCATTGATGAAACAACGAAAGAAGTTATCTGGAAATACCAGCAAGACAACAAGCCTGATGATAAGCCGAAAC TGGAAGTTGCCAGCTGGCAGGAGGAAGTTGAGGGCAAACAGGTAACGCGTTATGCCTTTATTGATGAGGCGGAGTTTAAA ACAAAAGAGTCTCTGGAGGCTGCAAAGGCAAAAATCTTTGAGAAGTTTCCTGGATTAAAGGAGTGTAAGGACCCAACTTA CCACTACGAGGTCAACTGTCTGGAATATCGTCCTGGCACGGGGGTTCCGGTTACTGGTGGCATGTATGTTCCACAGTATA CGCAATTAAGCCTTAACGCCGACACGGCAAAAGCGATGGTGCAGGCTGCGGATTTAGGCACCAACATTCAGCGTCTGTAT CAGCATGAGCTCTACTTCCGGACCAATGGTCGCAAAGGTGAGCGTCTGAGCAGCGTCGATCTGGAACGTCTGTACCAGAA CATGTCGGTCTGGCTGTGGAACGATACGAGCTATCGTTATGAAGAAGGCAAAAATGACGAGCTGGGCTTTAAAACGTTCA CCGAGTTCCTGAACTGCTATACCAACGATGCCTATACCGATGGCACACGGTGCTCCGCAGATCTGAAAAAATCGCTGGTC GATAACAACATGATCTACGGTGACGGTAGCAGCAAAGCGGGCATGATGAACCCGAGCTATCCACTCAACTATATGGAAAA ACCGCTGACGCGCCTGATGCTGGGCCGTTCCTGGTGGGATCTGAACATTAAGGTTGATGTGGAGAAGTACCCTGGAGCGG TATCTGTAGGGGGAGAAGAGGTTACTGAAACCATCAGCCTGTACTCGAATCCGACCAAATGGTTTGCAGGTAACATGCAG TCAACTGGCCTGTGGGCACCGGCTCAGAAAGAGGTCACCATTAAGTCCAATGCGAACGTTCCTGTGACCGTCACCGTGGC GCTGGCTGACGACCTGACCGGACGTGAGAAGCATGAAGTTGCGCTGAACCGTCCGCCAAGAGTGACTAAAACGTACTCTC TGGACGCTAGCGGTACGGTGAAGTTCAAGGTGCCTTACGGTGGCCTGATTTATATCAAGGGCAATAGCTCTACCAATGAA TCTGCCAGCTTCACCTTTACTGGCGTGGTAAAAGCACCGTTCTATAAAGACGGCGCATGGAAAAACGATCTGAACTCACC GGCTCCGCTGGGTGAGCTGGAATCAGACGCTTTCGTCTATACCACACCGAAGAAGAACCTGAATGCCAGCAATTACACTG GCGGATTGGAGCAATTCGCTAACGATCTGGACACCTTTGCCAGCTCGATGAATGACTTCTACGGTCGTAATGATGAAGAC GGTAAGCACCGGATGTTTACCTTTAAAAACTTGCCGGGTCACAAACACCGTTTCACCAACGATGTGCAGATCTCCATCGG TGATGCGCACTCTGGTTACCCGGTGATGAACAGCAGCTTCTCGCCGAACAGCACCACGCTGCCGACGACGCCGCTGAACG ACTGGCTGATCTGGCATGAAGTCGGTCATAACGCCGCAGAAACGCCGTTGACTGTACCGGGTGCTACTGAAGTTGCGAAC AACGTGCTGGCGCTGTACATGCAGGATCGCTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCGTTGCGCCGGA ATATCTGGAGGAGAGCAACGGTCAGGCATGGGCGCGTGGCGGTGCGGGTGATCGTCTGCTGATGTACGCACAACTGAAGG AATGGGCAGAGAAAAACTTTGATATCACGAAGTGGTATCCAGAAGGTAACCTGCCTAAGTTCTACAGCGAGCGTGAAGGG ATGAAAGGCTGGAACCTGTTCCAGTTGATGCATCGTAAAGCACGCGGCGATGAGGTCAGCAATGACAAGTTTGGCGGCAG AAATTACTGTGCTGAATCCAACGGTAACGCTGCAGACACGCTGATGCTGTGTGCCTCCTGGGTCGCCCAGACGGATCTTT CGGAGTTCTTTAAGAAATGGAATCCAGGTGCGAATGCTTACCAGTTGCCGGGGGCGAGCGAGATGAGCTTCGAGGGCGGT GTGAGCCAGTCGGCTTACAACACGCTCGCGTCACTCGATCTGCCGAAACCGAAGCAAGGGCCGGAAACCATTAACAAGGT TACCGAGCATAAGATGTCTGTCGAGTAA Protein sequence : MPEVKPDPTPNPEPTPEPTPDPEPTPEPTPDPEPTPEPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFKPGEDVT CVAGNTTIATFNTQSEAARSLRAVEKVSFSLEDAQELAASDNKKSNAVSLVTSSNSCPADTEQVCLEFSSVIESKRFDSL YKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPVVPATTPGTKPDLNASFVSANAEQFYQYQPTEIIRSEGRLVDSQG YGVAGVNYYTNSGRGVTGENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTRQNNTR VVPDDVRKVFAEYPNVINEIINLSLSNGATLDEGEQVVNLPNEFIEQFNTGQAKEIDTAICAKTDGCNEVRWFSLTTRNV NDGQIQGVINKLWGVDEDYKSVTKFHVFHDSTNFYGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNEL AYITEAPSIVQPENVTRETATFNLPFISLGQVGKGKLMVIGNPHYNSILRCPNGYSWNGSVNKDGQCTLNSDSDDMKNFM ENVLRYLSNDRWLPDAKSNMTVGTNLDTVYFKKHGQVTGNSAAFGFHPDFAGISVEHLSSYGDLDPQDMPLLILNGFEYV TQVGGDPYAVPLRADTSKPKLTQQDVTDLIAYLNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQ GYPDRVRQQRATGIWVYERYPFVDGKPPYTIDETTKEVIWKYQQDNKPDDKPKLEVASWQEEVEGKQVTRYAFIDEAEFK TKESLEAAKAKIFEKFPGLKECKDPTYHYEVNCLEYRPGTGVPVTGGMYVPQYTQLSLNADTAKAMVQAADLGTNIQRLY QHELYFRTNGRKGERLSSVDLERLYQNMSVWLWNDTSYRYEEGKNDELGFKTFTEFLNCYTNDAYTDGTRCSADLKKSLV DNNMIYGDGSSKAGMMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSVGGEEVTETISLYSNPTKWFAGNMQ STGLWAPAQKEVTIKSNANVPVTVTVALADDLTGREKHEVALNRPPRVTKTYSLDASGTVKFKVPYGGLIYIKGNSSTNE SASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELESDAFVYTTPKKNLNASNYTGGLEQFANDLDTFASSMNDFYGRNDED GKHRMFTFKNLPGHKHRFTNDVQISIGDAHSGYPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVAN NVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQAWARGGAGDRLLMYAQLKEWAEKNFDITKWYPEGNLPKFYSEREG MKGWNLFQLMHRKARGDEVSNDKFGGRNYCAESNGNAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGG VSQSAYNTLASLDLPKPKQGPETINKVTEHKMSVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 90 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 48 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 47 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO55CA74_17575 | YP_006160631.1 | lipoprotein acfD-like protein precursor | VFG0106 | Protein | 0.0 | 48 |
