Gene Information

Name : ECO55CA74_17540 (ECO55CA74_17540)
Accession : YP_006160624.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : putative general secretion pathway protein G precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3638083 - 3638538 bp
Length : 456 bp
Strand : -
Note : COG2165 Type II secretory pathway, pseudopilin PulG

DNA sequence : 
ATGAATTCGTTATCCCGCACACAAAAACCACGGGCAGGTTTTACCCTGCTGGAAGTGATGGTGGTGATTGTTATTCTTGG
CGTCCTGGCAAGTCTGGTGGTGCCTAACCTGTTGGGCAACAAAGAAAAAGCCGATCGGCAAAAAGCCATCAGCGATATCG
TGGCGCTGGAAAACGCACTGGATATGTACCGACTGGATAACGGGCGTTATCCGACCACAGAACAGGGGCTTGAGGCGCTG
ATCCAGCAACCGGCCAATATGGCGGATTCCCGCAACTACCGTACCGGTGGGTACATTAAACGACTGCCAAAAGATCCGTG
GGGCAATGATTATCAGTATCTCAGTCCGGGTGAAAAAGGACTGTTTGATGTTTACACCCTGGGGGCGGATGGTCAGGAAA
ATGGGGAAGGCGCTGGCGCAGATATCGGTAACTGGAATTTGCAGGAGTTTCAGTAA

Protein sequence : 
MNSLSRTQKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADRQKAISDIVALENALDMYRLDNGRYPTTEQGLEAL
IQQPANMADSRNYRTGGYIKRLPKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-66 100
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 9e-66 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_17540 YP_006160624.1 putative general secretion pathway protein G precursor VFG2050 Protein 3e-66 99
ECO55CA74_17540 YP_006160624.1 putative general secretion pathway protein G precursor VFG0180 Protein 2e-37 55
ECO55CA74_17540 YP_006160624.1 putative general secretion pathway protein G precursor VFG1871 Protein 1e-33 53