|
Name : ECO55CA74_17535 (ECO55CA74_17535) Accession : YP_006160623.1 Strain : Escherichia coli RM12579 Genome accession: NC_017656 Putative virulence/resistance : Virulence Product : general secretion pathway protein H Function : - COG functional category : - COG ID : - EC number : - Position : 3637516 - 3638079 bp Length : 564 bp Strand : - Note : COG2165 Type II secretory pathway, pseudopilin PulG DNA sequence : GTGCCTGAACGCGGATTCACACTTCTGGAAATCATGCTGGTGATTTTCCTTATCGGCCTTGCCAGTGCGGGCGTGGTACA GACGTTTGCGACCGATTCTGAATCGCCCGCGAAAAAAGCGGCGCAGGATTTTCTGACTCGCTTTGCGCAGTTTAAAGACA GGGCAGTGATCGAAGGGCAGACACTCGGTGTACTAATCGACCCGCCGGGATACCAGTTTATGCAGCGTCGTCAGGGGCAG TGGTTGCCCGTTTCTGCGACCCGGTTATCGGCACAGGTTACGGTGCCGAAACAGGTGCAGATGCTGTTACAACCCGGAAG TGATATCTGGCAGAAGGAATATGCGCTGGAGCTGCAACGTCGTCGCCTGACGCTGCACGATATTGAACTGGAGTTGCAAA AAGAGGCGAAAAAGAAGACGCCGCAGATCCGTTTTTCGCCTTTTGAACCCGCCACGCCGTTTACGTTGCGCTTCTACTCA GCGGCGCAAAACGCATGTTGGGCGGTAAAACTGGCACACGATGGCGCGTTATCCCTCAGTCAATGTGATGAGAGGATGCC ATGA Protein sequence : MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSESPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRQGQ WLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS AAQNACWAVKLAHDGALSLSQCDERMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspH | CAE85230.1 | GspH, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-79 | 99 |
| gspH | YP_854403.1 | type II secretion protein GspH | Not tested | PAI I APEC-O1 | Protein | 2e-84 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO55CA74_17535 | YP_006160623.1 | general secretion pathway protein H | VFG2051 | Protein | 4e-79 | 98 |
