Gene Information

Name : ECO55CA74_17505 (ECO55CA74_17505)
Accession : YP_006160617.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3632886 - 3633578 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGACAGAAAGTATTGGCGGTAAAGCCGCCCCGGACTGGGCCATGAAACAGGATTTTCGCTGCGGCTGCTGGCTGATGGA
GAAACCGGAAACCGCAATGAAAGCCATCACACGCAATCTCGATCGCGAAATCTGGCGTGACCTGATGCAACGTTCAGGGA
TGCTTTCCTTAATGGATGCACAGGCCCGTGATACATGGTACCGGTCACTGGAGTACGATAATTTTCCGGAAATCAGTGAA
GCGAACATTCTGAGCACATTTGAACAACTACACCAGAATAAGGATGAGGTGTTTGAGCGAGGGGTGATCAACGTCTTCAG
GGGACTGAACTGGAATTACAAAACCAATTGCCCCTGCAAATTTGGCAGTAAAATTATCGTCAACAACCTGGTGAGGTGGG
ACCGGTGGGGGTTTCATCTTATCACCGGGCAACAGACTGACCGACTCGTCGACCTGGAAAGAATGCTACATCTGTTCAGC
GGCAAACCGATCCCCGACAACCGGGAAAACATCACGATTCGTCTGGATGGTCACATCCAGTCCGTTCAGGGTAAAGAGCG
CTATGAAGACGAGATGTTCATCATTAAATACTTTAAGAAGGGATCTGCACACATCACTTTCAAAAGGCTGGAACTGATTG
ACAGAATTAACGATATAATAGCCAGGTACTTTCCTTCTGTGCTCTCAGCCTGA

Protein sequence : 
MTESIGGKAAPDWAMKQDFRCGCWLMEKPETAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEISE
ANILSTFEQLHQNKDEVFERGVINVFRGLNWNYKTNCPCKFGSKIIVNNLVRWDRWGFHLITGQQTDRLVDLERMLHLFS
GKPIPDNRENITIRLDGHIQSVQGKERYEDEMFIIKYFKKGSAHITFKRLELIDRINDIIARYFPSVLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 1e-107 99
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 3e-108 99
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 2e-106 98
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 6e-105 97
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 6e-105 97
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 4e-105 97
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 4e-100 91
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 2e-101 90
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 2e-101 90
unnamed AAL57572.1 unknown Not tested LEE Protein 6e-101 90
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 9e-100 90
unnamed CAI43851.1 hypothetical protein Not tested LEE Protein 4e-70 89
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 4e-99 89
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-98 88
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-98 88
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 6e-91 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_17505 YP_006160617.1 hypothetical protein VFG0666 Protein 2e-105 97
ECO55CA74_17505 YP_006160617.1 hypothetical protein VFG1533 Protein 2e-100 91
ECO55CA74_17505 YP_006160617.1 hypothetical protein VFG1685 Protein 3e-91 85