Gene Information

Name : ECO55CA74_17420 (ECO55CA74_17420)
Accession : YP_006160600.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3619727 - 3620296 bp
Length : 570 bp
Strand : -
Note : -

DNA sequence : 
ATGACCTACAAATACAACCCCTTCTGGCAGCAACGTATTCGTGAGACGGTGCGGCACGCACTGAATGTTCATCCCCGACT
GACGGCATTGCGGGTTGACCTGCGTTTCCCGGATGTACCGGCAGCAACGGACGCAGCTGTGATATCCCGCTTCATCAATG
CCCTGAAAGCCCGAATCGACGCTTACCAGAAACGTAAGCATCGGGAAGGTAAACGCGTGCATCCCACCACTCTGCATTAC
GTCTGGGCCCGGGAGTTTGGGGAGTGCAAAGGTAAAAAACACTATCATCTGATGCTGCTGGTCAACCGGGATACCTGGTG
TCGTGCCGGTGATTACCGCGCTCCGGGATCACTGGCCGGGATGATTAAACAGGCGTGGTGCAGTGCCCTGGGAGTGGATA
CCGGAGATCATACCACGCTGGCGCATTTTCCGGTCAGGCCGGCGGTGTGGCTGGAACGCGATGATGACACCGGCTTTCAG
CAGGTGCTGGAGCGTGCTGACTATCTGGCGAAGGAGAGTACCAAAGCTTACGGCACCGGTGAGCGCAACTTTGGCTGCAG
TCGTGGCTGA

Protein sequence : 
MTYKYNPFWQQRIRETVRHALNVHPRLTALRVDLRFPDVPAATDAAVISRFINALKARIDAYQKRKHREGKRVHPTTLHY
VWAREFGECKGKKHYHLMLLVNRDTWCRAGDYRAPGSLAGMIKQAWCSALGVDTGDHTTLAHFPVRPAVWLERDDDTGFQ
QVLERADYLAKESTKAYGTGERNFGCSRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3573 YP_003223434.1 hypothetical protein Not tested LEE Protein 2e-87 100
APECO1_1084 YP_853104.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 7e-82 95
unnamed ADD91714.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-79 93
unnamed AAL08464.2 unknown Not tested SRL Protein 7e-81 93
unnamed AAW51744.1 Aec61 Not tested AGI-3 Protein 5e-79 92
unnamed CAI43834.1 hypothetical protein Not tested LEE Protein 4e-79 92
unnamed CAD42091.1 hypothetical protein Not tested PAI II 536 Protein 1e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_17420 YP_006160600.1 hypothetical protein VFG1055 Protein 3e-81 93
ECO55CA74_17420 YP_006160600.1 hypothetical protein VFG1610 Protein 4e-37 41