Gene Information

Name : ECO55CA74_17380 (ECO55CA74_17380)
Accession : YP_006160592.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Unknown
Product : transposase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3615502 - 3615927 bp
Length : 426 bp
Strand : +
Note : COG2963 Transposase and inactivated derivatives

DNA sequence : 
ATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAACTTCGTATGGTTGAACTGGCATC
ACAACCTGGAGCTTGTGTTGCACAGATTGCACGAGAAAATGGCGTCAATGATAATGTTATTTTCAAATGGCTCAGGCTCT
GGCAGAACGAAGGGCATGTTTCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAA
ATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCACTTCCACTCAGACCAGAGTCAGTGC
CAGTTCCTGCAAGGTGGAATTCCGTCACGGTAACATGACGCTGGAAAATCCATCGCCAGAGCTGCTCACGATGTTAATCC
GCGAACTGAGCGGGAGGGGAAGATGA

Protein sequence : 
MELQDWRKEPRKKYSNEFKLRMVELASQPGACVAQIARENGVNDNVIFKWLRLWQNEGHVSRRLPVTTSSDTGVELLPVE
ITPDEQKEPVAAIAPSLSTSTQTRVSASSCKVEFRHGNMTLENPSPELLTMLIRELSGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 3e-62 100
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 8e-57 90
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 4e-56 89
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 2e-44 88
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 7e-48 80
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 7e-48 80
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 4e-45 75
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 2e-31 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_17380 YP_006160592.1 transposase-like protein VFG1672 Protein 8e-45 88
ECO55CA74_17380 YP_006160592.1 transposase-like protein VFG1666 Protein 2e-45 75
ECO55CA74_17380 YP_006160592.1 transposase-like protein VFG1738 Protein 5e-32 54