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Name : ECO55CA74_17355 (ECO55CA74_17355) Accession : YP_006160589.1 Strain : Escherichia coli RM12579 Genome accession: NC_017656 Putative virulence/resistance : Virulence Product : ST47 protein Function : - COG functional category : - COG ID : - EC number : - Position : 3602629 - 3603303 bp Length : 675 bp Strand : + Note : - DNA sequence : ATGATTAATCCTGTTACTAATACTCAGGGCGTGTCCCCTATAAATACTAAATATGCTGAACATGTGGTGAAAAATATTTA CCCGGAAATTAAACATGATTACTTTAATGAATCACCCAATATATATGATAAGAAGTATATATCCGGTATAACCAGAGGAG TAGCTGAACTAAAACAGGAAGAATTTGTTAACGAGAAAGCCAGACGGTTTTCTTATATGAAGACTATGTATTCTGTATGT CCAGAAGCGTTTGAACCTATTTCCAGAAATGAAGCCAGTACACCGGAAGGAAGCTGGCTAACAGTTATATCCGGAAAACG CCCAATGGGGCAGTTTTCTGTAGATAGTTTATACAATCCTGATTTACATGCATTATGTGAGCTTCCGGACATTTGTTGTA AGATCTTCCCTAAAGAAAATAATGATTTTTTATACATAGTTGTTGTGTACAGAAATGACAGCCCTCTAGGAGAACAACGG GCAAATAGATTTATAGAATTATATAATATAAAAAGAGATATCATGCAGGAATTAAATTATGAGTTACCAGAGTTAAAGGC AGTAAAATCTGAAATGATTATCGCACGTGAAATGGGAGAAATCTTTAGCTACATGCCTGGGGAAATAGACAGTTATATGA AATACATAAATAATAAACTTTCTAAAATTGAGTAG Protein sequence : MINPVTNTQGVSPINTKYAEHVVKNIYPEIKHDYFNESPNIYDKKYISGITRGVAELKQEEFVNEKARRFSYMKTMYSVC PEAFEPISRNEASTPEGSWLTVISGKRPMGQFSVDSLYNPDLHALCELPDICCKIFPKENNDFLYIVVVYRNDSPLGEQR ANRFIELYNIKRDIMQELNYELPELKAVKSEMIIAREMGEIFSYMPGEIDSYMKYINNKLSKIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nleE | YP_003223427.1 | T3SS effector NleE | Virulence | LEE | Protein | 4e-103 | 100 |
| Z4329 | NP_289554.1 | hypothetical protein | Not tested | OI-122 | Protein | 4e-103 | 100 |
| ECO26_5293 | YP_003232173.1 | T3SS effector NleE | Virulence | LEE | Protein | 4e-103 | 100 |
| st47 | CAC81885.1 | ST47 protein | Not tested | LEE II | Protein | 3e-103 | 100 |
| unnamed | CAI43816.1 | hypothetical protein | Not tested | LEE | Protein | 3e-103 | 100 |
| ECO111_3726 | YP_003236065.1 | T3SS secreted effector NleE | Virulence | LEE | Protein | 2e-102 | 99 |
| unnamed | AAL57564.1 | unknown | Not tested | LEE | Protein | 4e-103 | 99 |
