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Name : ECO55CA74_01660 (ECO55CA74_01660) Accession : YP_006157517.1 Strain : Escherichia coli RM12579 Genome accession: NC_017656 Putative virulence/resistance : Unknown Product : Integrase for prophage CP-933I Function : - COG functional category : - COG ID : - EC number : - Position : 348901 - 350082 bp Length : 1182 bp Strand : + Note : COG0582 Integrase DNA sequence : ATGCCTTTAAACGATATGCAGATTCGCCGCGCTAAGCCTGAAGCTAAAGCCTATACACTTGGAGATGGGCTAGGGTTGTC ATTACTTATAGAACCTAATGGAAGCAAGAGTTGGCGGTTCCGCTATCGCTATGCCGGCAAACCCAAAATGATCTCGCTTG GTGTTTACCCAACGATCACCCTTGCCGATGCTCGTTCCCGTCGTGATGAAGCTCGAAAACTTGTGGCAGAAGGAAAGAAC CCTAGTGAGGTTCGAAAAGAGCAAAAGCTAGCTATGCAAACAGAGTCAGAGAACGCCTTCGAAAAGATAGCCAGAGAGTG GCATCAACTTAAATCTGCTAAATGGTCGGCGGGATATGCATCAGACATCATGGAAGCGTTTAAGAACGACATTTTTCCTT ATGTCGGAACAAGGCCTGTGGGAGAGATTAAACCGCTAGAGCTGCTGAACGTTCTGCGTAAAATTGAGAAACGTGGTGCG TTGGAGAAAATGCGCAAAGTGCGGCAGCGTTGCTCCGAAGTGTTTCGCTACGCAATTGCAACGGGTAGGGCGGAGTACAA TCCTGCGGCTGATCTCTCCAGCGCTCTCGAAGTACACCAATCCAATCATTTCCCATTCCTAAAAGCTGATGAGATACCTG ATTTTCTACGTGCCTTAGAGGGTTACTCCGGGAGTAAGCTTGTCCAGATAGCCACGAAATTACTGATGATTACGGGTGTG AGAACCATCGAATTACGCGCGGCATTATGGCAAGAATTTGATCTGGATAACGCTATTTGGGAAATTCCTGCTGAAAGGAT GAAAATGCGTAGGCCACATCTTGTGCCCTTATCATCTCAAGCGGTAGATTTACTCAATGAACTCAAGATCATGACAGGGA ACTATCGTTATGTTTTTCCAGGGCGGAACGATCCGAATAGGCCAATGAGCGAAGCGAGTATAAATCAAGCCATTAAGCGT ATTGGGTATGGAGGAAAAGTCACTGGACATGGTTTTCGTCATACCCTTTCTACAATCCTGCATGAGCAAGGTTTTGAGAG TGCTTGGATTGAAATCCAGTTGGCTCATGTAGATAAAAATTCTATTAGGGGGACTTATAACCATGCTCAATATTTTAGTG GAAGGAAGTCTATGATGGACTGGTACAGTAATTTGATATTTGAAAGACTAAAAAGGAGTTAA Protein sequence : MPLNDMQIRRAKPEAKAYTLGDGLGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTITLADARSRRDEARKLVAEGKN PSEVRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYASDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGA LEKMRKVRQRCSEVFRYAIATGRAEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYSGSKLVQIATKLLMITGV RTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVDLLNELKIMTGNYRYVFPGRNDPNRPMSEASINQAIKR IGYGGKVTGHGFRHTLSTILHEQGFESAWIEIQLAHVDKNSIRGTYNHAQYFSGRKSMMDWYSNLIFERLKRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 2e-125 | 64 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 2e-125 | 62 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 1e-125 | 62 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 9e-126 | 62 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 6e-125 | 62 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 8e-125 | 62 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 8e-125 | 62 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 9e-126 | 61 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 1e-125 | 61 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 9e-126 | 61 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 1e-125 | 61 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 9e-122 | 59 |
| SESS1635_03816 | AFO66367.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 2e-75 | 42 |
| SESS1296_03598 | AFO66301.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 2e-75 | 42 |
| BJAB0715_01002 | YP_008216150.1 | Integrase | Not tested | AbaR27 | Protein | 3e-69 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO55CA74_01660 | YP_006157517.1 | Integrase for prophage CP-933I | VFG0598 | Protein | 3e-125 | 62 |
| ECO55CA74_01660 | YP_006157517.1 | Integrase for prophage CP-933I | VFG0783 | Protein | 5e-126 | 61 |
