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Name : ECO55CA74_14245 (ECO55CA74_14245) Accession : YP_006159978.1 Strain : Escherichia coli RM12579 Genome accession: NC_017656 Putative virulence/resistance : Virulence Product : chaperone protein PapD Function : - COG functional category : - COG ID : - EC number : - Position : 2929336 - 2930094 bp Length : 759 bp Strand : - Note : COG3121 P pilus assembly protein, chaperone PapD DNA sequence : ATGACGAATCTATTTTGCTCTGCCAGAACGGCCGCAACGACGCTGGCGTTACTGATAACTGCCGCCAGCCTGTCAGTACA GGCCTCTGTCACGCCGGACCGTACACGCCTGATTTTTAACGAAAGTGATAAATCAATCAGCGTCACGCTGCGCAATAACG ACCCGAAAATGCCGTATCTGGCACAAAGCTGGATGGAAGATGGACAGGGTAACAGGATTAGCTCGCCACTGACGGTCCTG CCGCCAGTGCAGCGCATCGATTCCATGATGAACGGTCAGGTGAAGGTACAGGGCATGCCGGATATCAACAAGCTGCCTGC CGACCGCGAGAGCGTGTTCTATTTCAACGTGCGTGAGATCCCGCCGAAATCGAACAAACCTAACACGCTACAGATAGCGC TGCAGACGCGCATTAAGTTGTTCTGGCGACCAAAGGCGCTGGAAAACGTCAGCATGAAAAACCCGTGGCAGCATAAGGTG ACCTTAACCCGCAGCGGTCAGGAGTTTACCGTCAATAACCCGACGCCGTACTTCGTGGTTATCAGTAACGCCAGTGCGCA GAAAAATGGCAATCCGGCAGCGGGATTTTCCCCCATGGTGATATCGCCAAAAACCTCTGTGCCGTTAAAAGTCAAAATGG ATAGCGTCCCGGTGCTGACCTATGTGAATGATTATGGTGCGCGTTTGCCGCTGTTCTTCCGCTGTACGGGAAATACCTGT CAGGTGGACGAAGAGCAAAACAGCAAAGGCCAGGGATAG Protein sequence : MTNLFCSARTAATTLALLITAASLSVQASVTPDRTRLIFNESDKSISVTLRNNDPKMPYLAQSWMEDGQGNRISSPLTVL PPVQRIDSMMNGQVKVQGMPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENVSMKNPWQHKV TLTRSGQEFTVNNPTPYFVVISNASAQKNGNPAAGFSPMVISPKTSVPLKVKMDSVPVLTYVNDYGARLPLFFRCTGNTC QVDEEQNSKGQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 2e-47 | 42 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 4e-47 | 42 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 6e-47 | 42 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 6e-47 | 42 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 6e-47 | 42 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 5e-47 | 42 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 5e-42 | 41 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 2e-47 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO55CA74_14245 | YP_006159978.1 | chaperone protein PapD | VFG1547 | Protein | 9e-48 | 42 |
| ECO55CA74_14245 | YP_006159978.1 | chaperone protein PapD | VFG0896 | Protein | 3e-47 | 42 |
| ECO55CA74_14245 | YP_006159978.1 | chaperone protein PapD | VFG0885 | Protein | 2e-42 | 41 |
