Gene Information

Name : ECO55CA74_14005 (ECO55CA74_14005)
Accession : YP_006159930.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : -
COG ID : -
EC number : 2.6.1.2
Position : 2884764 - 2885981 bp
Length : 1218 bp
Strand : +
Note : COG0436 Aspartate/tyrosine/aromatic aminotransferase

DNA sequence :
ATGTCCCCCATTGAAAAATCCAGCAAATTAGAGAATGTCTGTTATGACATCCGTGGTCCGGTGCTGAAAGAAGCAAAACG
CCTGGAAGAAGAAGGTAACAAGGTACTGAAACTGAACATCGGCAACCCAGCCCCGTTCGGTTTTGACGCGCCAGATGAAA
TCCTCGTTGACGTGATACGCAACCTGCCTACCGCTCAAGGGTATTGCGATTCCAAAGGTCTTTACTCCGCGCGTAAAGCC
ATCATGCAGCACTATCAGGCTCGTGGCATGCGTGATGTTACCGTGGAAGATATTTACATCGGCAATGGTGTATCGGAGCT
TATCGTTCAGGCAATGCAGGCATTGCTGAACAGCGGGGACGAAATGTTGGTTCCTGCACCAGATTACCCACTATGGACCG
CGGCGGTTTCGCTTTCCAGCGGTAAAGCGGTGCATTATCTTTGCGATGAATCCTCTGACTGGTTCCCGGACCTCGATGAT
ATTCGCGCTAAAATTACGCCTCGTACGCGTGGGATCGTTATTATCAACCCAAATAACCCAACCGGCGCGGTATATTCCAA
AGAGCTTTTAATGGAGATTGTGGAGATTGCACGTCAGCATAATCTCATTATCTTCGCCGATGAAATTTATGACAAAATTC
TCTACGACGACGCTGAGCATCACTCAATTGCGCCGCTGGCACCTGACCTGCTGACCATTACCTTTAATGGACTGTCGAAA
ACGTACCGCATTGCAGGCTTCCGTCAGGGGTGGATGGTGTTGAACGGGCCGAAAAAACACGCCAAAGGCTACATCGAAGG
TCTGGAAATGCTGGCTTCAATGCGCCTGTGTGCTAACGTTCCTGCGCAACACGCCATTCAGACCGCGCTGGGTGGTTATC
AGAGCATCAGTGAATTTATTACCCCTGGCGGTCGTCTTTATGAGCAGCGTAACCGCGCGTGGGAATTGATCAACGATATT
CCGGGCGTTTCCTGCGTGAAACCTCGTGGTGCGCTGTACATGTTCCCGAAAATCGACGCCAAACGCTTTAACATTCACGA
CGATCAGAAAATGGTGCTGGATTTCCTGTTGCAGGAAAAAGTTCTGTTGGTGCAAGGGACGGCATTCAACTGGCCGTGGC
CGGATCACTTCCGCATTGTCACGCTACCGCGTGTCGATGATATCGAGCTGTCGTTGAGCAAGTTCGCGCGTTTCCTTTCT
GGTTATCATCAGCTGTAA

Protein sequence :
MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKA
IMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDD
IRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSK
TYRIAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDI
PGVSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSLSKFARFLS
GYHQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 8e-126 62
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 8e-126 62
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 8e-126 62
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 8e-126 62