|
Name : ECO55CA74_12065 (ECO55CA74_12065) Accession : YP_006159550.1 Strain : Escherichia coli RM12579 Genome accession: NC_017656 Putative virulence/resistance : Unknown Product : transposase ORF B, IS3 family protein Function : - COG functional category : - COG ID : - EC number : - Position : 2474685 - 2475431 bp Length : 747 bp Strand : + Note : COG2801 Transposase and inactivated derivatives DNA sequence : TTGTGCAGCGAAATACGCCGGGCGTGGAACCAAAGTAGGGGCTCTGCGGGGGCGCGCACGCTGGCTGAAATGCTGACCCA AAACGGCGTCCCGATGAGCCGTTACCGTGCCGGGCGTCTGATGAAATATCTGAACCTGAGCAGTTGTCAGCCCGGAAAAC ATCAGTACAAAAATGCTCGTCAGGAACATACCTGCCTGCCGAATCTGCTTGAGCGCCAGTTCGCTGTGCCCGAGCCAGAT AGGGTATGGTGCGGAGATATTACGTATATCTGGGCAGGAAATCGCTGGTGCTATCTGGCGGTCGTCATGGATCTTTTTGC CCGCAGGGTTATCGGCTGGAGCCTGTCAGCGAATGCCGATACTGCCCTGATAAGCAGTGCCCTGCGGATGGCGTATGAGG TGCGTGGTCAGCCGCGGGACGTCATGTTCCATAGCGACCAGGGAAGTCAATATACAGGACTGAAATATCAACAACTTCTC TGGCGTTACAGGATAAAGCAAAGTGTCAGCCGACGGGGAAACTGCTGGGATAACAGTCCAATGGAACGCTTCTTCCGCAG TCTGAAAACAGAATGGGTGCCAACCGATGGCTACACAGGCAAAGACGTGGCCCGGCAGCAAATCAGCAGTTATATTCTGA ATTATTACAATAGCGTCAGGCCTCACCATTATAACGGAGGGCTGACGCCGGAAGAGTCAGAGAACAGATATCATTTTTAC TGTAAAACCGTGGCCAGTATTACTTGA Protein sequence : MCSEIRRAWNQSRGSAGARTLAEMLTQNGVPMSRYRAGRLMKYLNLSSCQPGKHQYKNARQEHTCLPNLLERQFAVPEPD RVWCGDITYIWAGNRWCYLAVVMDLFARRVIGWSLSANADTALISSALRMAYEVRGQPRDVMFHSDQGSQYTGLKYQQLL WRYRIKQSVSRRGNCWDNSPMERFFRSLKTEWVPTDGYTGKDVARQQISSYILNYYNSVRPHHYNGGLTPEESENRYHFY CKTVASIT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z5089 | NP_290241.1 | transposase | Not tested | LEE | Protein | 2e-104 | 100 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 1e-100 | 100 |
| unnamed | ACU09432.1 | IS911 transposase orfB | Not tested | LEE | Protein | 2e-104 | 100 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 2e-100 | 100 |
| ECO111_3779 | YP_003236114.1 | putative IS602 transposase OrfB | Not tested | LEE | Protein | 6e-110 | 95 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 6e-100 | 95 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 6e-100 | 95 |
| overlap with orfA characteristic of IS3 family members | AGK06947.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 5e-74 | 64 |
| orfB | AGK06993.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 5e-74 | 64 |
| orfB | AGK07051.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 5e-74 | 64 |
| orfB | ACX47958.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 5e-74 | 64 |
| VC1789 | NP_231424.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 7e-74 | 64 |
| VPI2_0008c | ACA01825.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 5e-74 | 64 |
| orfB | YP_001217329.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 7e-74 | 64 |
| orfB | AGK06910.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 5e-74 | 64 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 1e-67 | 62 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 1e-67 | 62 |
| RS04 | AAP82949.1 | putative transposase | Not tested | PAPI-2 | Protein | 2e-62 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO55CA74_12065 | YP_006159550.1 | transposase ORF B, IS3 family protein | VFG0785 | Protein | 1e-104 | 100 |
| ECO55CA74_12065 | YP_006159550.1 | transposase ORF B, IS3 family protein | VFG1122 | Protein | 3e-74 | 64 |
| ECO55CA74_12065 | YP_006159550.1 | transposase ORF B, IS3 family protein | VFG1484 | Protein | 8e-68 | 62 |
