Gene Information

Name : ECO55CA74_12050 (ECO55CA74_12050)
Accession : YP_006159547.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : ParB-like nuclease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2473153 - 2473791 bp
Length : 639 bp
Strand : -
Note : COG1475 Predicted transcriptional regulators

DNA sequence :
ATGGGGGATTCTGTGACACCGGAGATACTGAGCAACATGATTCGTCAGTACTTTAGCCAGGAACGACCAGAAGAAGAGGC
CATACAGGCCCTGAATCATCTGCGCAGGGTACTTCATGAGGTCAGTCCTTTTGCACAGGAGCCTGTGGACTGTGTGTTGT
GGGTGAAAGCGGATGAGGTGGTGGCCAACGATTACAATCCCAATGTCATGTCTTCCAGTGAAAAAAAACTGCTTAAACAT
TCACTGGAGCAGGATGGATTCACGCAGCCTGTGGTGGTTTCGGAAGAGAAGGAGCATTATCTGGTCGTGGATGGTTTTCA
TCGTCAGTTGCTGGGCAGGAAAGCGGATACGAGAAAACGTCTGAAGGGCTGGCTGCCAGTGGCCTGTATTAATCCAGAGA
GAAAGGGACAGGCATCACGTATTGCCGCGACCATACGGCATAACCGTGCCAGGGGAAAACACCAGATAACGTCAATGTCT
GACATTGTCAGGGACCTTTCGCGTCTGGGCTGGACAGATGAGCGTATTGGCACAGAGTTGGGCATGGACCAGGATGAAGT
GCTGAGGCTGAAACAGATTAGCGGGCTGACAGAGCTGTTTCAGGAAGAGAATTTCAGCCCGGCATGGACGGTTCGTTGA

Protein sequence :
MGDSVTPEILSNMIRQYFSQERPEEEAIQALNHLRRVLHEVSPFAQEPVDCVLWVKADEVVANDYNPNVMSSSEKKLLKH
SLEQDGFTQPVVVSEEKEHYLVVDGFHRQLLGRKADTRKRLKGWLPVACINPERKGQASRIAATIRHNRARGKHQITSMS
DIVRDLSRLGWTDERIGTELGMDQDEVLRLKQISGLTELFQEENFSPAWTVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 2e-88 98
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-86 93
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-86 93
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 2e-86 92
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 2e-86 92
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-68 89
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-68 89
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-68 89
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 3e-71 78
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 2e-73 77
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 6e-25 46
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 2e-26 46
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 3e-26 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_12050 YP_006159547.1 ParB-like nuclease VFG1505 Protein 9e-89 98