Gene Information

Name : ECO55CA74_09385 (ECO55CA74_09385)
Accession : YP_006159018.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Unknown
Product : transposase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1958058 - 1959266 bp
Length : 1209 bp
Strand : -
Note : COG3328 Transposase and inactivated derivatives

DNA sequence :
ATGGACGAAAAACAGTTGCAGGCTCTGGCTAACGAACTGGCCAAAAATCTCAAAACCCCTGAAGATCTCAGCCAGTTCGA
TCGCCTGCTGAAGAAAATCAGCGTTGAGGCAGCTCTCAACGCTGAAATGTCCCACCATCTGGGCTACGATAAAAACCAGC
CTAAACCGGGTGCCAACTCCCGCAATGGCTATTCCACAAAGACCGTTATCACCGGTGATGGCCACCTGGAACTACGCACT
CCGCGCGATCGTGATGGCTCTTTTGAACCGCAACTTGTGAAGAAAAACCAGACCCGGATCACCGGGATGGATAACCAGAT
CCTGTCGTTGTACGCCAAAGGCCTGACAACCCGCGAAATAGCGGCTGCGTTTAAAGAGCTGTATGACGCTGATGTCTCAC
CGGCGCTGGTATCGAAGGTCACCGATGCCGTTATGGAGCAGGTAGTCGAATGGCAAAACCGGCCACTGGATGCGGTCTAT
CCCATTGTTTATCTTGACTGTATTGTCCTGAAGGTTCGGCAGGACAGTCGCGTAATCAATAAATCCGTATTCCTCGCACT
GGGTATCAATATCGAAGGCCAGAAAGAGTTACTGGGTATGTGGCTGGCCGAAAACGAGGGAGCGAAGTTCTGGCTCAATG
TGCTGACTGAACTAAAAAACCGCGGCCTGAACGATATTCTCATAGCCTGTGTCGACGGGCTGAAAGGCTTCCCGGACGCT
ATCAACACGGTGTATCCGGAAGCCCGCATCCAGCTGTGCATCGTGCATATGGTGCGCAACAGCCTGCGGTTCGTTTCCTG
GAAGGACTACAAAGCCGTCACCCGCGACCTGAAAGCCATCTACCAGGCCCCCACAGAAGAAGCAGGCCAGCAGGCGCTGG
AAGCGTTCGCCAGCGCCTGGGACAGTCGCTACCCGCAGATAAGCCGGAGCTGGCAGGCAAACTGGACCAACCTGGCGATG
TTCTTCGCTTACCCGGCAGATATCCGCAAAGTCATCTACACAACCAACGCCATCGAGTCGCTGAACAGCGTAATCCGGCA
TGCCATCAAAAAACGCAAGGTGTTCCCGACGGATGACTCAGTGAAAAAGGTCGTGTGGCTGGCAATCCAGGCGGCTTCAC
AGAAATGGACGATGCCACTGCGGGACTGGCGTATGGCAATGAGCCGCTTTATTATCGAGTTCGGTGACCGCCTGGACGGT
CACTTCTGA

Protein sequence :
MDEKQLQALANELAKNLKTPEDLSQFDRLLKKISVEAALNAEMSHHLGYDKNQPKPGANSRNGYSTKTVITGDGHLELRT
PRDRDGSFEPQLVKKNQTRITGMDNQILSLYAKGLTTREIAAAFKELYDADVSPALVSKVTDAVMEQVVEWQNRPLDAVY
PIVYLDCIVLKVRQDSRVINKSVFLALGINIEGQKELLGMWLAENEGAKFWLNVLTELKNRGLNDILIACVDGLKGFPDA
INTVYPEARIQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAPTEEAGQQALEAFASAWDSRYPQISRSWQANWTNLAM
FFAYPADIRKVIYTTNAIESLNSVIRHAIKKRKVFPTDDSVKKVVWLAIQAASQKWTMPLRDWRMAMSRFIIEFGDRLDG
HF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 9e-156 76
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 2e-88 45
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 8e-82 42
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 9e-80 41
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 3e-75 41