Gene Information

Name : ECO55CA74_09155 (ECO55CA74_09155)
Accession : YP_006158974.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : F9 fimbriae chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1911626 - 1912336 bp
Length : 711 bp
Strand : -
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGCAAACTACGCGTACCCCCTACTCTATTTCCTTTATGGCGACAGTGTTACTTTTATTGCTCTTTGCTTGCCATAGCAC
CGTTGCCAACGCAGCTGTCGCACTGGGTGCGACGCGGGTAATTTATCCGGCAAACCAGAAACAGGTTTTATTGCCTGTCA
CGAATAATGATCCTGCCAGTGTCTATCTCATTCAGTCATGGATAGAAAATGCTGGTGACCAAAAAGACACCCAGTTTGTC
ATTACCCCACCTCTTTTTTCCATGCAAGGTAAAAAAGAGAATACGCTGCGGATAATCAACGCCACTAATCATCAGTTACC
CGGCGACCGTGAAAGCCTGTTCTGGGTTAATGTTAAAGCTATTCCTGCTATGGAAAAAGACCAGAAGAATGAGAATACAT
TACAGCTGGCAATTATTAGCCGCATAAAAATGTTTTATCGGCCCACGAACCTGGCAATGGCACCTGAAGAAGCGCCTGCA
ATGCTTCGGTTTCGTCGCAGCGGTAGCAATCTCACTCTTATTAATCCAACGCCCTACTTCATTACCGTAACAAATATGAA
AGCAGGAAATAGCAATCTCCCAAACACCATGGTGCCGCCAAAAGGTGAAGTGTCGGTGGATATCCCGCATGCTGCCACCG
GGGATATCAGTTTTCAGACGATCAATGATTACGGCGCATTAACTCCGCGTATTAAGGCAACCATGCAGTAA

Protein sequence : 
MQTTRTPYSISFMATVLLLLLFACHSTVANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQFV
ITPPLFSMQGKKENTLRIINATNHQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTNLAMAPEEAPA
MLRFRRSGSNLTLINPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAATGDISFQTINDYGALTPRIKATMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 3e-68 65
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 2e-66 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_09155 YP_006158974.1 F9 fimbriae chaperone VFG1644 Protein 9e-67 64
ECO55CA74_09155 YP_006158974.1 F9 fimbriae chaperone VFG0911 Protein 5e-67 64
ECO55CA74_09155 YP_006158974.1 F9 fimbriae chaperone VFG0875 Protein 1e-70 60
ECO55CA74_09155 YP_006158974.1 F9 fimbriae chaperone VFG0445 Protein 2e-58 49