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Name : ECO55CA74_09150 (ECO55CA74_09150) Accession : YP_006158973.1 Strain : Escherichia coli RM12579 Genome accession: NC_017656 Putative virulence/resistance : Virulence Product : Fimbrial usher family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1908933 - 1911584 bp Length : 2652 bp Strand : - Note : COG3188 P pilus assembly protein, porin PapC DNA sequence : ATGACAGCCTTTCGTGCCGCATTTAAGGCATATCGTATGCATCAGGTGTTACTACTGCCTCGCTTTGCACGGCTTACCAT TGCCCTTAGCTTAGCAACTGCGGTATTTCCCGTTGACGCAGAGTATTATTTTAATCCACGGTTTTTAAGCAATGATCTTG CTGAATCTGTCGATTTATCCGCCTTTACTAAGGGACGCGAGGCACCACCTGGTACATATCGGGTCGACATTTATTTGAAC GACGAATTTATGACTAGTCGGGATATTACTTTTATTACAGATGATAATAACGCAGATCTCATCCCATGCCTGAGTACAGA TCTTCTTGTCAGTCTTGGCATAAAAAAATCTGCGTTATTAGACAATAAGGAACATTCAGCAGAAAAACATGTGCCGGACA ACAGCGCATGCACACCACTTCAGGATCGTTTGGTCGACGCATCAACTGAGTTTGATGTTGGTCAGCAACATCTGTCACTC TCCGTTCCGCAAATTTATGTTGGCAGAATGGCTCGCGGCTATGTTTCTCCTGATCTGTGGGAAGAAGGAATAAATGCTGG GCTTCTAAACTATAGTTTTAATGGTAATTCTATTAATAATCGTAGTAACCATAATGCAGGAAAATCCAACTATGCATATT TGAATTTACAGAGTGGCATCAACATTGGTAGTTGGCGACTACGCGATAACTCAACGTGGAGTTATAACAGTGGGAGTAGC AATTCATCTGACAGCAATAAATGGCAGCATATCAATACGTCGGCTGAACGTGACATTATTCCCTTACGCTCACGGTTAAC GGTAGGTGATAGTTATACCGATGGCGATATTTTTGATAGTGTGAACTTTCGTGGCCTCAAAATAAATTCAACAGAAGCGA TGTTGCCCGATAGCCAACATGGTTTCGCTCCGGTGATTCATGGTATTGCCCGTGGCACCGCACAAGTGAGTGTAAAACAG AACGGATACGATGTTTATCAGACTACTGTTCCACCCGGCCCTTTTACTATTGATGATATCAACTCTGCGGCCAATGGTGG TGATCTGCAAGTAACCATAAAAGAGGCAGACGGCAGTATTCAGACATTATATGTTCCTTATTCGTCTGTTCCGGTTCTCC AACGTGCTGGATATACGCGTTATGCGCTTGCCATGGGGGAATATCGTAGTGGAAATAACCTGCAAAGCTCCCCCAGGTTC ATACAAGGTAGCTTGATGCATGGACTGGAAGGAAACTGGACACCTTATGGCGGAATGCAAATTGCAGAAGATTATCAGGC CTTCAACCTTGGTATTGGTAAAGATTTAGGACTTTTTGGTGCCTTTTCTTTCGATATCACGCAGGCCAATACGACACTTG CAGATGGCACCCGTCACAGCGGGCAATCGGTTAAATCCGTCTACAGCAAATCCTTCTACCAGACAGGAACCAATATCCAG GTCGCAGGATATCGCTATTCTACGCAAGGTTTTTATAACTTATCCGACAGTGCCTACAGTCGAATGAGTGGTTACACCGT CAAGCCTCCTACCGGAGACAGCAATGAGCAGACACAATTTATTGATTATTTTAATCTGTTCTACAGTAAGCGTGGTCAGG AACAAATAAGCATCTCTCAGCAGCTTGGAAATTACGGTACGACATTTTTCAGTGCCAGTCGCCAAAGTTACTGGAACACG TCACGCAGCGACCAGCAAATATCATTTGGATTAAATTTGCCGTTTGGTGATATTACGACTTCGCTGAATTACAGCTATTC CAATAATATATGGCAAAACGATCGGGATCATTTACTCGCTTTTACGCTTAATGTTCCCTTCAGTCATTGGATGCGTACAG ACAGTCAGTCGGCATTTCGTAATTCAAACGCCAGTTACAGTATGTCAAACGATTTGAAAGGCGGCATGACCAATCTATCG GGGGTTTATGGCACTCTGCTGCCGGATAATAACCTGAATTATAGCGTTCAGGTCGGTAACACCCACGGAGGTAATACATC GTCTGGCACCAGTGGTTACAGTACTCTTAATTATCGTGGAGCTTACGGCAATACTAATGTCGGTTACAGTCGGAGTGGTG ACAGCAGCCAGATTTATTACGGAATGAGTGGTGGGATTATTGCTCATGCTGATGGCATCACCTTTGGACAGCCGCTGGGC GACACAATGGTTCTGGTTAAGGCTCCTGGCGCTGATAATGTCAAAATAGAGAACCAGACCGGAATTCATACCGACTGGCG TGGCTATGCCATATTACCATTTGCGACAGAATATAGAGAAAATCGTGTCGCTCTTAACGCGAATTCCCTTGCAGATAATG TTGAACTGGATGAAACCGTGGTCACTGTCATCCCAACTCACGGTGCTATTGCCAGAGCAACATTTAATGCACAAATCGGC GGGAAAGTATTAATGACGTTGAAGTACGGTAATAAAAGCGTTCCATTCGGTGCAATTGTCACTCACGGAGAGAATAAAAA TGGCAGCATTGTCGCGGAAAACGGTCAGGTTTATCTGACTGGACTTCCACAGTCAGGGAAATTACAGGTTTCATGGGGCA ATGATAAAAACTCAAACTGTATTGTCGATTACAAGCTTCCTGAAGTCTCTCCTGGAACCTTGCTGAACCAGCAGACAGCA ATCTGTCGCTAA Protein sequence : MTAFRAAFKAYRMHQVLLLPRFARLTIALSLATAVFPVDAEYYFNPRFLSNDLAESVDLSAFTKGREAPPGTYRVDIYLN DEFMTSRDITFITDDNNADLIPCLSTDLLVSLGIKKSALLDNKEHSAEKHVPDNSACTPLQDRLVDASTEFDVGQQHLSL SVPQIYVGRMARGYVSPDLWEEGINAGLLNYSFNGNSINNRSNHNAGKSNYAYLNLQSGINIGSWRLRDNSTWSYNSGSS NSSDSNKWQHINTSAERDIIPLRSRLTVGDSYTDGDIFDSVNFRGLKINSTEAMLPDSQHGFAPVIHGIARGTAQVSVKQ NGYDVYQTTVPPGPFTIDDINSAANGGDLQVTIKEADGSIQTLYVPYSSVPVLQRAGYTRYALAMGEYRSGNNLQSSPRF IQGSLMHGLEGNWTPYGGMQIAEDYQAFNLGIGKDLGLFGAFSFDITQANTTLADGTRHSGQSVKSVYSKSFYQTGTNIQ VAGYRYSTQGFYNLSDSAYSRMSGYTVKPPTGDSNEQTQFIDYFNLFYSKRGQEQISISQQLGNYGTTFFSASRQSYWNT SRSDQQISFGLNLPFGDITTSLNYSYSNNIWQNDRDHLLAFTLNVPFSHWMRTDSQSAFRNSNASYSMSNDLKGGMTNLS GVYGTLLPDNNLNYSVQVGNTHGGNTSSGTSGYSTLNYRGAYGNTNVGYSRSGDSSQIYYGMSGGIIAHADGITFGQPLG DTMVLVKAPGADNVKIENQTGIHTDWRGYAILPFATEYRENRVALNANSLADNVELDETVVTVIPTHGAIARATFNAQIG GKVLMTLKYGNKSVPFGAIVTHGENKNGSIVAENGQVYLTGLPQSGKLQVSWGNDKNSNCIVDYKLPEVSPGTLLNQQTA ICR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 58 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECO55CA74_09150 | YP_006158973.1 | Fimbrial usher family protein | VFG0876 | Protein | 0.0 | 59 |
| ECO55CA74_09150 | YP_006158973.1 | Fimbrial usher family protein | VFG1645 | Protein | 0.0 | 55 |
| ECO55CA74_09150 | YP_006158973.1 | Fimbrial usher family protein | VFG0912 | Protein | 0.0 | 54 |
| ECO55CA74_09150 | YP_006158973.1 | Fimbrial usher family protein | VFG0446 | Protein | 9e-160 | 43 |
