Gene Information

Name : ECO55CA74_08020 (ECO55CA74_08020)
Accession : YP_006158755.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1674810 - 1676297 bp
Length : 1488 bp
Strand : +
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGAATTTTCATCATCTGGCTTACTGGCAGGATAAAGCGTTAAGTCTCGCCATTGAAAACCGCTTATTTATTAACGGTGA
ATATACTGCTGCGGCGGAAAATGAAACCTTTGAAACCGTTGATCCGGTTACCCAGGCACCGCTGGCGAATATTGCGCGCG
GCAAGAGCGTCGATATCGACCGTGCGGTGAGCGCAGCACGCGGCGTATTTGAACGCGGCGACTGGTCACTCTCTTCTCCG
GCAAAACGTAAAGCGGTGCTGAATAAACTCGCCGATTTAATAGAAGCCAACGCCGAAGAGCTGGCACTGCTGGAAACTCT
CGACACCGGCAAACCGATTCGTCACAGTCTGCGTGATGATATACCCGGCGCGGCGCGCGCCATTCGCTGGTACGCCGAAG
CGATCGACAAAGTGTATGGCGAAGTGGCGACCACCAGTAGCCATGAGCTGGCGATGATCGTGCGTGAACCGGTCGGCGTG
ATTGCCGCCATCGTGCCGTGGAACTTCCCGCTGCTGCTGACTTGCTGGAAGCTTGGCCCGGCGCTGGCAGCAGGGAACAG
CGTTGTCCTGAAACCGTCTGAAAAATCACCGCTCAGTGCGATTCGTCTCGCGGGGCTGGCGAAAGAAGCAGGCTTGCCGG
ATGGTGTGTTGAACGTGGTGACGGGTTTTGGTCATGAAGCGGGGCAGGCGCTGTCGCGTCATAACGATATCGACGCCATT
GCCTTTACCGGTTCGACCCGTACCGGGAAACAGCTGCTGAAAGATGCAGGCGACAGCAACATGAAACGCGTCTGGCTGGA
AGCGGGCGGCAAAAGCGCCAACATCGTTTTCGCTGACTGCCCGGATTTGCAACAGGCGGCAAGCGCCACCGCAGCAGGCA
TCTTCTACAACCAGGGGCAGGTGTGCATCGCCGGAACGCGCCTGTTGCTGGAAGAGAGCATAGCCGATGAATTCTTAGCC
CTGTTAAAACAGCAGGCGCAAAACTGGCAGCCGGGCCATCCACTTGATCCCGCAACCACCATGGGCACCTTAATCGACTG
CGCCCACGCCGACTCGGTCCATAGCTTTATTCAGGAAGGCGAAAGCAAAGGGCAACTGTTGTTGGATGGCCGTAACGCCG
GGCTGGCTGTCGCCATCGGCCCGACCATCATTGTGGATGTAGACCCGAATGCGTCCTTAAGCCGCGAAGAGATTTTCGGT
CCGGTGCTGGTGGTCACGCGTTTCACATCAGAAGAACAGGCGCTACAGCTTGCCAACGACAGCCAGTACGGCCTTGGCGC
GGCGGTATGGACGCGCGACCTCTCCCGCGCGCACCGCATGAGCCGACGCCTGAAAGCCGGTTCCGTCTTCGTCAATAACT
ACAACGACGGCGATATGACCGTGCCGTTTGGCGGCTATAAGCAGAGCGGCAACGGTCGCGACAAATCCCTGCATGCCCTT
GAAAAATTCACCGAACTGAAAACCATCTGGATAAGCCTGGAGGCCTGA

Protein sequence :
MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVTQAPLANIARGKSVDIDRAVSAARGVFERGDWSLSSP
AKRKAVLNKLADLIEANAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGV
IAAIVPWNFPLLLTCWKLGPALAAGNSVVLKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAI
AFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLA
LLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIQEGESKGQLLLDGRNAGLAVAIGPTIIVDVDPNASLSREEIFG
PVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHAL
EKFTELKTIWISLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 8e-107 52
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-69 41
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_08020 YP_006158755.1 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase VFG0082 Protein 4e-69 41