Gene Information

Name : ECO55CA74_05725 (ECO55CA74_05725)
Accession : YP_006158307.1
Strain : Escherichia coli RM12579
Genome accession: NC_017656
Putative virulence/resistance : Virulence
Product : chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1218513 - 1219214 bp
Length : 702 bp
Strand : +
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGTTCGTCCACATGGGCGGC
AGGTAAAGGCGGGGTTGAACTTGCAGCAACACGTCTTGTTTATTCGGAAGGTGAAGAGCAAATTTCACTGGGTGTACGTA
ACACCAGTCCGGATGTTCCTTATCTGATTCAGTCATGGGTGATGACCCCAGATAATAAAAAATCAGCGGACTTTATTATT
ACACCACCGCTATTTGTGCTGAATCCGGCAAACGAGAATCTGTTACGCATTATGTACATTGGCGCGCCGTTGGCGAAAGA
CAGAGAAACTCTTTTCTTCACTAGCGTACGGGCAGTCCCTTCAACAACGAAGCGGGAAGAAGGCAATACCCTGAAGATTG
CCACACAAAGCGTCATCAAACTTTTCTGGCGACCAAAAGGTTTAGCGTATCCCTTAGGCGAGGCTCCGGCGAAACTGCGT
TGCACTTCGTCAGCTGACATGGTTACGGTCAGTAACCCAACACCTTATTTCATTACCCTGACAGACCTGAAAATAGGTGG
AAAGTTAGTTAAAAATCAAATGATTTCCCCCTTTGATAAATACCAATTCTCTCTGCCAAAGGGTGCCAAAAATAGCAGCG
TAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAA

Protein sequence : 
MKTCITKGIVTVSLTAILLSCSSTWAAGKGGVELAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFII
TPPLFVLNPANENLLRIMYIGAPLAKDRETLFFTSVRAVPSTTKREEGNTLKIATQSVIKLFWRPKGLAYPLGEAPAKLR
CTSSADMVTVSNPTPYFITLTDLKIGGKLVKNQMISPFDKYQFSLPKGAKNSSVTYRTINDYGAETPQLNCKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 3e-38 45
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 6e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECO55CA74_05725 YP_006158307.1 chaperone VFG0911 Protein 2e-37 45
ECO55CA74_05725 YP_006158307.1 chaperone VFG1644 Protein 3e-37 45
ECO55CA74_05725 YP_006158307.1 chaperone VFG0875 Protein 3e-38 45
ECO55CA74_05725 YP_006158307.1 chaperone VFG0445 Protein 2e-37 42