Gene Information

Name : i14_4882 (i14_4882)
Accession : YP_006156937.1
Strain : Escherichia coli clone D i14
Genome accession: NC_017652
Putative virulence/resistance : Unknown
Product : transposase IS629
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4906701 - 4907915 bp
Length : 1215 bp
Strand : +
Note : -

DNA sequence :
ATGACTAAAAATACACGTTTTTCCCCCGAAGTCCGTCAACGGGCAGTTCGTATGGTTCTGGAAAGTCAGGGCGAATATGA
CTCACAATGGGCGGCAATTTGTTCCATTACCCCAAAGATTGGCTGTACGCCGGAGACTCTGCGTGTCTGGGTACGCCAGC
ATGAGCGGGATACCGGAGGCGGTGATGGTGGGCTCACCACCACTGAACGTCAGCGTCTGAAAGAGCTGGAGCGTAAAAAT
CGTGAACTGCGCCGCAGTAACGATATCCTTCGCCAGACTTCCGCTTATTTTGCGAAGGCGGAGTTCGACCGCCTCTGGAA
AAAAATAATGCCACTGCTGGATAAGCTGCGTGAGCAGTGCGGGGTCGGACCGGTATGCAGTGAACTGCATATTGCCCCGT
CAACGTATTACCACTGTCAGCAACAGCGACATCGTCCTGATAAACGCAGTACCCGTGCGCAGCGCGATGACTGGCTGAAG
AAAGAGATACTGCGCGTATACGATGAGAATCATCAGGTATACAGTGTACGTAAAGTCTGGCGTCAGTTGTTACGGGAAGG
TATCAGAGTGGCCAGGTGCACTGTGGCACGTCTCATGGCGGTTATGGGGCTTGCCGGTGTTCTCCAGGGTAAAAAGGTCC
GCACTACCGTCAGCCGGAAAGCCATTACCGCAGGCGACCGCGTAAACCGTCAGTTCGGGGCAGAACGTCCTGACCAGTTG
TGGGTGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTTTATGTGGCGTTCATCATTGATGTGTTCGCCGGATA
CATCGTGGGATGGCGGGTCTCATCGTCCATGGAAACGACATTCGTGCTGGATGCACTGGAGCAGGCAGTATGGGACCGTC
GTCCGTCTGGCACTATCCATCACTGTGATAAAGGTTCTCTGTATGTATCGCTGGCCTACACGCAGCGGCTTAAGGAAGCA
GGATTACTGGCATCAACAGGGAGCACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGC
GGAGGTAATACACCGTAATAGCTGGAAAAACCGGACAGAAGTGGAACTGGCCACACTAACGTGGGTGGACTGGTATAACA
ATCGACGATTGCTGGGAAGGCTGGGTCATATCCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCAGAAACGAT
GATCTGGCAGCCTGA

Protein sequence :
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSITPKIGCTPETLRVWVRQHERDTGGGDGGLTTTERQRLKELERKN
RELRRSNDILRQTSAYFAKAEFDRLWKKIMPLLDKLREQCGVGPVCSELHIAPSTYYHCQQQRHRPDKRSTRAQRDDWLK
KEILRVYDENHQVYSVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLQGKKVRTTVSRKAITAGDRVNRQFGAERPDQL
WVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQAVWDRRPSGTIHHCDKGSLYVSLAYTQRLKEA
GLLASTGSTGDSYDNAMAESINGLYKAEVIHRNSWKNRTEVELATLTWVDWYNNRRLLGRLGHIPPAEAEKAYYASIRND
DLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-128 93
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 2e-124 93
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 8e-129 93
Z1198 NP_286733.1 transposase Not tested TAI Protein 7e-127 93
Z1638 NP_287141.1 transposase Not tested TAI Protein 7e-127 93
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 3e-124 93
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 4e-127 93
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 3e-124 93
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-127 93
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 3e-124 93
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-127 93
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 3e-125 93
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 7e-128 93
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 1e-127 93
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-128 93
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 7e-128 92
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-123 90
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 1e-48 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
i14_4882 YP_006156937.1 transposase IS629 VFG1602 Protein 1e-123 90