Gene Information

Name : i14_4159 (i14_4159)
Accession : YP_006156228.1
Strain : Escherichia coli clone D i14
Genome accession: NC_017652
Putative virulence/resistance : Virulence
Product : small GTP-binding domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4153623 - 4154636 bp
Length : 1014 bp
Strand : +
Note : -

DNA sequence :
ATGGATGACCCGGTAAAGGGCGAAGGCCGGATGATTACTGATGCCAGTGGCGTCACCAGAAGGGAAGGCGGGATTTTGGG
AATGTGGAGCAATATATTTCCAGAACGTAATGGTAGCAACGAGCAAAAAGGTGATAGCACACCGCGCATACCCGACATCA
GGGATATTCTTGATATTTTCCCTCAGCCACTGCGGGAAAAGCTGTTGAACAAAATCAGTGAAGCCATCGACTATGAACCC
GTGATTGGTGTCATGGGAAAAACTGGCGCGGGGAAAAGCAGCGTATGTAATGCGCTGTTTAAAGGGGAGGTTTGTGCAGT
TAGCGACGTTGAGGCATGTACTCGTGAAGTTCAGGAATTGCATATACGCTTCGGAAAACATTCGCTGAAGATAATTGATA
TACCTGGTGTCGGTGAGAATGCCCGGCGGGATAAGGAGTATGAAGATTTATACCGCAATTTGCTTCCCTCCCTGGATCTC
ATCCTGTGGGTAATAAAAGGTGACGATCGGGCCTTTTCTGCGGATGAGCATTTCTACAACAATGTTCTGCTCCCTGCTGG
TGGGGGTGAGCGCGTTTTATTCGTCCTTAACCAGGTTGATAAAATTGAGCCATTCCGCGAGTGGGATACTCATCTGCATC
AGCCATCTCCTGCACAGCGCATCAACATCGAAAAGAAAGAAGCCTACATTACTGAACGATTTGGTTTTACGCACTATCCG
GTGACACCTGTCTCCGCCGATGAGGGCTACAACATTCTTCGTCTGGTAGAGACTATTATTCGGGCTTTGCCTGATCGGGC
TAAAAGTAGCACGGCTTCGCAGTTTAAGGATGAGTTCAAAACCGAAGAGGTCAAGACGGAAGCAAAAAACGGCTTCGGCA
GCGTAATCTCCGGGATACTCGACGACGTTATTGATTCTTTTCCGTTACCAAAGCCTGTCAAAGAGCTTACCCGTAAGGGT
AAAGACAAACTTATCGAGTGGGCTGGTAATGCCTGGGACCATTTTTTTGGATAG

Protein sequence :
MDDPVKGEGRMITDASGVTRREGGILGMWSNIFPERNGSNEQKGDSTPRIPDIRDILDIFPQPLREKLLNKISEAIDYEP
VIGVMGKTGAGKSSVCNALFKGEVCAVSDVEACTREVQELHIRFGKHSLKIIDIPGVGENARRDKEYEDLYRNLLPSLDL
ILWVIKGDDRAFSADEHFYNNVLLPAGGGERVLFVLNQVDKIEPFREWDTHLHQPSPAQRINIEKKEAYITERFGFTHYP
VTPVSADEGYNILRLVETIIRALPDRAKSSTASQFKDEFKTEEVKTEAKNGFGSVISGILDDVIDSFPLPKPVKELTRKG
KDKLIEWAGNAWDHFFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08471.1 unknown Not tested SRL Protein 3e-47 45
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 5e-47 45
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 2e-47 45
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 7e-47 45
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 6e-47 45
Z1210 NP_286745.1 histone Not tested TAI Protein 1e-45 45
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 1e-45 45
unnamed AAL99256.1 unknown Not tested LEE Protein 4e-47 45
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 9e-47 45
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 5e-47 45
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 5e-47 45
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 7e-46 44
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 2e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
i14_4159 YP_006156228.1 small GTP-binding domain protein VFG1062 Protein 2e-47 45
i14_4159 YP_006156228.1 small GTP-binding domain protein VFG0654 Protein 4e-47 45
i14_4159 YP_006156228.1 small GTP-binding domain protein VFG1674 Protein 4e-47 45