Gene Information

Name : gspH (i14_3384)
Accession : YP_006155463.1
Strain : Escherichia coli clone D i14
Genome accession: NC_017652
Putative virulence/resistance : Virulence
Product : putative type II secretion protein GspH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3391804 - 3392367 bp
Length : 564 bp
Strand : -
Note : -

DNA sequence : 
GTGCCTGAACGCGGATTCACACTTCTGGAAATCATGCTGGTGATTTTCCTTATCGGCCTTGCCAGTGCGGGCGTGGTACA
GACGTTTGCGACCGCTTCAGAGCCGCCTGCGAAAAAAGCGGCGCAGGATTTTCTGACTCGCTTTGCGCAGTTTAAGGACA
GGGCAGTGATCGAAGGGCAAACACTCGGTGTGCTAATCGACCCGCCAGGTTACCAGTTTATGCAGCGTCGTCACGGGCAA
TGGTTGCCCGTTTCTGCGACCCGGTTATCGGCACAGGTTACGGTGCCGAAACAGGTGCAGATGCTGTTACAACCCGGAAG
TGATATCTGGCAGAAGGAATATGCGCTGGAGCTGCAGCGTCGTCGCCTGACGCTGCACGATATTGAACTGGAGCTGCAAA
AAGAGGCGAAAAAGAAGACACCGCAGATCCGTTTTTCGCCTTTTGAACCCGCCACGCCGTTTACACTGCGTTTTTACGCG
TCGGCACAAAACGCGTGTTGGGCGGTAAAGCTGGCGCACGATGGCGTGTTATCCCTCAATCAATGTGATGAGGGGATGCC
ATGA

Protein sequence : 
MPERGFTLLEIMLVIFLIGLASAGVVQTFATASEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRHGQ
WLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYA
SAQNACWAVKLAHDGVLSLNQCDEGMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspH YP_854403.1 type II secretion protein GspH Not tested PAI I APEC-O1 Protein 2e-84 98
gspH CAE85230.1 GspH, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-78 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspH YP_006155463.1 putative type II secretion protein GspH VFG2051 Protein 4e-78 96